DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf1 and ARFA1E

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_191788.1 Gene:ARFA1E / 825402 AraportID:AT3G62290 Length:181 Species:Arabidopsis thaliana


Alignment Length:53 Identity:14/53 - (26%)
Similarity:25/53 - (47%) Gaps:3/53 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ALQSLRKFKSLILSHHVSG--DRIRCVATEALRRAENQEEFVDAVFEDVGLKV 117
            ||:|:......:::....|  ||:.....:..|:.|..||.| .:..|:.|:|
plant   133 ALRSVNLLADTVINMERRGDWDRVTVTHRKKSRKVETSEEMV-RIRGDLSLEV 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 14/53 (26%)
ARFA1ENP_191788.1 PLN00223 1..181 CDD:165788 12/48 (25%)

Return to query results.
Submit another query.