DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and ARLA1C

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_190556.2 Gene:ARLA1C / 824149 AraportID:AT3G49870 Length:184 Species:Arabidopsis thaliana


Alignment Length:193 Identity:63/193 - (32%)
Similarity:105/193 - (54%) Gaps:21/193 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG--NVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-------IPTIGFNVETV 56
            ||  ..|.|..:.||.|:||.:.::||..||||:::      .:|.|       |||:|||:..|
plant     1 MGLLEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLV------NVVATGGYSEDMIPTVGFNMRKV 59

  Fly    57 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVL 121
            ...|::..:||:|||.:.|.:|..|.:....:::|||:.|.:.:..::.||..:|::..|....|
plant    60 TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPL 124

  Fly   122 LIFANKQDLPNAMNAAEITDKLGLHSLRNRN---WYIQATCATSGDGLYEGLDWLSNQLKNAN 181
            |:..||.|.|.|::...:||::||.||.:|.   :.|....:|:.|   :.:|||....|:.|
plant   125 LVLGNKIDKPGALSKEALTDEMGLTSLTDREVCCFMISCKNSTNID---QVIDWLVKHSKSKN 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 59/183 (32%)
ARLA1CNP_190556.2 Arl10_like 21..179 CDD:206724 52/166 (31%)

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