DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and ARFB1A

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_179133.1 Gene:ARFB1A / 816020 AraportID:AT2G15310 Length:205 Species:Arabidopsis thaliana


Alignment Length:179 Identity:119/179 - (66%)
Similarity:142/179 - (79%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||..|:.:.|....|.::||||||||.:|||||||||||||:|||:||||||:||||||.|:|||
plant     1 MGARFSRIAKRFLPKSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||:|||:|||.||||||||.|||||||||:|.||:.|||.||.|:|.::||..|.:|:||||||.
plant    66 WDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDS 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            .||:..||:.:|||||||..|.|.||.|.|.||.||||||:|||..:.|
plant   131 RNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPN 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 116/173 (67%)
ARFB1ANP_179133.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 119/179 (66%)

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