DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and Arl4d

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_079680.1 Gene:Arl4d / 80981 MGIID:1933155 Length:201 Species:Mus musculus


Alignment Length:174 Identity:75/174 - (43%)
Similarity:109/174 - (62%) Gaps:9/174 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPL 77
            :.::::|||:||||::||:||..|.|.::||.|||.|.:..     :.|:|.|||||||:|:|||
Mouse    22 LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPL 86

  Fly    78 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDK 142
            ||.|.:.|.||:|||||.:.||:.|||.||.|:....:.:...:|:.|||||.|.|::|||:..:
Mouse    87 WRSYTRRTDGLVFVVDSAETERLEEARMELHRISKASDNQGVPVLVLANKQDQPGALSAAEVEKR 151

  Fly   143 LGLHSLRNRN-WYIQATCATSGDGLYEGLDWLSNQL---KNANR 182
            |.:..|.... .::|...|..|.||..||:.|...:   |.|.|
Mouse   152 LAVRELAAATLTHVQGCSAVDGLGLQPGLEHLYEMILKRKKAPR 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 72/169 (43%)
Arl4dNP_079680.1 Arl4_Arl7 19..201 CDD:206719 75/174 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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