DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf1 and Arl10

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_064352.2 Gene:Arl10 / 56795 MGIID:1930788 Length:243 Species:Mus musculus


Alignment Length:212 Identity:61/212 - (28%)
Similarity:100/212 - (47%) Gaps:47/212 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGK----------------------------------------KEMRILMVGL 25
            :|:|...|:|..||:                                        ::..:|::||
Mouse    20 LGSVLFILWKAYFGRGRERRWDRGEAWWGADTARLPQWDEWEPEDEEDEPALEELEQREVLVLGL 84

  Fly    26 DAAGKTTILYKLKLGE--IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
            |.:||:|.| ::..|:  :...:||.|||...:..||....:.::||...:|..|:.:......|
Mouse    85 DGSGKSTFL-RMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYWKEFVNEVDVL 148

  Fly    89 IFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRN- 152
            :|:|||.||.|:..||:||.::|..|.  |..::|.||||||..|||..|:..:|||.:..|:. 
Mouse   149 VFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQRE 211

  Fly   153 -WYIQATCATSGDGLYE 168
             :.:.|:.|.:|.|..|
Mouse   212 VFLLAASIAPAGSGFGE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 59/208 (28%)
Arl10NP_064352.2 P-loop containing Nucleoside Triphosphate Hydrolases 78..236 CDD:476819 55/154 (36%)

Return to query results.
Submit another query.