DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf1 and arl8a

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001186949.1 Gene:arl8a / 567222 ZFINID:ZDB-GENE-030131-5025 Length:186 Species:Danio rerio


Alignment Length:172 Identity:54/172 - (31%)
Similarity:99/172 - (57%) Gaps:1/172 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVW 66
            |...:.||.||.|:||.:.:|||..:||||.:..:..|:. ...|||:|||:..:...|::..:|
Zfish     6 NKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKITKGNVTIKLW 70

  Fly    67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLP 131
            |:|||.:.|.:|..|.:....::::||:.|.|:|..::.||..:|.:.:|:...:|:..||:|||
Zfish    71 DIGGQPRFRSMWERYCRGVSAIVYMVDAADPEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLP 135

  Fly   132 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWL 173
            .|::..|:.:::.|.::::|.....:......|.:...|.||
Zfish   136 GALDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 53/170 (31%)
arl8aNP_001186949.1 Arl10_like 22..180 CDD:206724 46/156 (29%)

Return to query results.
Submit another query.