DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arl8bb

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001313407.1 Gene:arl8bb / 562445 ZFINID:ZDB-GENE-080516-10 Length:186 Species:Danio rerio


Alignment Length:171 Identity:54/171 - (31%)
Similarity:99/171 - (57%) Gaps:1/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
            :.||.|:||.:.:|||..:||||.:..:..|:. ...|||:|||:..|...|::..:||:|||.:
Zfish    13 RSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPR 77

  Fly    74 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAE 138
            .|.:|..|.:....::::||:.|||::..:|.||..:|.:.:|:...:|:..||:||.:|::..:
Zfish    78 FRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLASALDEKQ 142

  Fly   139 ITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            :.:||.|.::::|.....:......|.:...|.||....|:
Zfish   143 LIEKLNLSAIQDREICCYSISCKEQDNIDITLQWLIQHSKS 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 53/169 (31%)
arl8bbNP_001313407.1 Arl10_like 22..180 CDD:206724 48/157 (31%)

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