DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arf4b

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001017707.1 Gene:arf4b / 550402 ZFINID:ZDB-GENE-050417-205 Length:180 Species:Danio rerio


Alignment Length:177 Identity:134/177 - (75%)
Similarity:156/177 - (88%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||..|:||:..||.|||||:||||||||||||:||||||||:||||||:|||||||||:||||||
Zfish     1 MGVFFSNLWTRLFEKKEMRLLMVGLDAAGKTTVLYKLKLGEVVTTIPTLGFNVETVEYRNISFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            |||||||.||.|||||:|||:||||||||:||:||..|.|||..||||||:||||||:.||||||
Zfish    66 WDVGGQDIIRRLWRHYYQNTKGLIFVVDSSDRDRIETAAEELKMMLAEDEMRDAVLLVLANKQDL 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 177
            |.||.|.|:|::||||:||.|.|::|:|||..|.|||||||||::||
Zfish   131 PKAMAAHELTERLGLHALRGRQWFVQSTCAVQGSGLYEGLDWLTDQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 132/173 (76%)
arf4bNP_001017707.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 134/177 (76%)

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