DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and sar1b

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001015871.1 Gene:sar1b / 548588 XenbaseID:XB-GENE-944209 Length:198 Species:Xenopus tropicalis


Alignment Length:168 Identity:35/168 - (20%)
Similarity:61/168 - (36%) Gaps:60/168 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 KLGHVNLTQMFMKNGIGLKEMRDYIRHAIDESRLAEKLNESDGFEVVVGSSGTIRAIENAVFSGY 235
            :||..:..::..::   ..|::|.|.|.:.::|  :.|...|||:.:..:.|.:  ||       
 Frog   252 RLGPCSFAELVFRD---WPELQDDIPHILAQAR--KILFVIDGFDELGAAPGAL--IE------- 302

  Fly   236 GADLCDFNLEGYKRDWR--------FGT---RELSSVVAKLCSEGDEEL------------IRRE 277
              |:|.        ||.        .|:   |.:....|.|.:.....|            ||.|
 Frog   303 --DICG--------DWEKKKPVPVLLGSLLNRVMLPKAALLVTTRPRALRDLRILAEEPIYIRVE 357

  Fly   278 GFFK--RRSEFIVAGAVLLEEIFKALGIEDMEVSEYAL 313
            ||.:  ||:.|:           :..|.||..:..:.|
 Frog   358 GFLEEDRRAYFL-----------RHFGDEDQAMRAFEL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 2/7 (29%)
sar1bNP_001015871.1 Sar1 3..197 CDD:206645
Blue background indicates that the domain is not in the aligned region.

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