DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and Arl5c

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_038942559.1 Gene:Arl5c / 497990 RGDID:1563128 Length:221 Species:Rattus norvegicus


Alignment Length:149 Identity:64/149 - (42%)
Similarity:97/149 - (65%) Gaps:7/149 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 YKLKL-------GEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 92
            :||.|       .|:|.|..|||.|||.:.::...|.:||:|||:.:|..|..|:.|.:.:|.|:
  Rat    69 HKLHLDKTPSLTNEVVHTCSTIGSNVEEIVFQRTHFLMWDLGGQEALRSTWETYYSNAEFVILVI 133

  Fly    93 DSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQA 157
            ||.||.|:..:||||.::||.:.|:||.:||||||||:.::|..|||:..|.|.::::..|:||.
  Rat   134 DSTDRNRLSTSREELYKILAHEALQDASVLIFANKQDVKDSMTTAEISQFLTLSAIKDHPWHIQG 198

  Fly   158 TCATSGDGLYEGLDWLSNQ 176
            .||.:|:||..||.|:.:|
  Rat   199 CCALTGEGLLAGLQWMHSQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 64/149 (43%)
Arl5cXP_038942559.1 P-loop_NTPase <79..217 CDD:422963 60/137 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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