DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and arl5b

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001006744.1 Gene:arl5b / 448415 XenbaseID:XB-GENE-996906 Length:179 Species:Xenopus tropicalis


Alignment Length:174 Identity:86/174 - (49%)
Similarity:125/174 - (71%) Gaps:1/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||.:||.|: ..|..:|.::::||||.|||||:||:..:.|:|.|.||||.|||.:..||..|.:
 Frog     1 MGLIFAKLW-NFFCNQEHKVIIVGLDNAGKTTLLYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLM 64

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||:|||:.:|..|..|:.||:.:|.||||.||||:...:|||.||||.::||.|.:||||||||:
 Frog    65 WDIGGQESLRSSWNTYYSNTEFIILVVDSTDRERLSITKEELYRMLAHEDLRKAAVLIFANKQDI 129

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLS 174
            ...|:||:|:..|.|.|:::..|:||:.||.:|:||.:||:|::
 Frog   130 KGCMSAADISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMT 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 84/170 (49%)
arl5bNP_001006744.1 Arl5_Arl8 3..175 CDD:133353 84/172 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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