DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and arl4a

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001006711.1 Gene:arl4a / 448350 XenbaseID:XB-GENE-5783083 Length:200 Species:Xenopus tropicalis


Alignment Length:182 Identity:81/182 - (44%)
Similarity:116/182 - (63%) Gaps:9/182 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFAN---LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY---- 58
            |||..:.   :..||...:.:.|.::|||.|||||:||:|:..|.|.|:||.|||.|.::.    
 Frog     1 MGNGLSEQTPILSGLSPFQALHIAILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNAEKIKVSLGN 65

  Fly    59 -KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLL 122
             |.::|..||||||:|:||||:.|.:.|.|::|||||.|.||:.||:.||.::....|.:...:|
 Frog    66 SKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDAERMEEAKTELHKITKISENQGVPVL 130

  Fly   123 IFANKQDLPNAMNAAEITDKLGLHSLRNRN-WYIQATCATSGDGLYEGLDWL 173
            |.||||||.|::..:||...|.|:...:.. |::|||||..||||.||::.|
 Frog   131 IVANKQDLRNSLTLSEIEKLLALNEFGSSTPWHLQATCAIIGDGLREGIEKL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 78/178 (44%)
arl4aNP_001006711.1 Arl4_Arl7 18..200 CDD:206719 76/165 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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