DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and arl5a

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001002339.1 Gene:arl5a / 436611 ZFINID:ZDB-GENE-040718-28 Length:179 Species:Danio rerio


Alignment Length:178 Identity:89/178 - (50%)
Similarity:126/178 - (70%) Gaps:1/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||.:|..|:: ||..:|.::::||||.||||||||:..:.|:|.|.||||.|||.:...|..|.:
Zfish     1 MGIIFTKLWR-LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTHFLM 64

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||:|||:.:|..|..|:.||:.:|.||||.|||||...||||.||||.::|:.|.|||||||||:
Zfish    65 WDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYRMLAHEDLKKAGLLIFANKQDV 129

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 178
            ...:..|||:..|.|.|:::..|:|||.||.:|:||.:||:|:.::|:
Zfish   130 KGCLTVAEISQSLQLTSVKDHQWHIQACCALTGEGLCQGLEWMMSRLR 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 87/174 (50%)
arl5aNP_001002339.1 Arl5_Arl8 3..175 CDD:133353 86/172 (50%)
SAR 8..172 CDD:197556 84/164 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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