DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf1 and arf2a

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_958912.1 Gene:arf2a / 399477 ZFINID:ZDB-GENE-040122-4 Length:181 Species:Danio rerio


Alignment Length:180 Identity:171/180 - (95%)
Similarity:175/180 - (97%) Gaps:0/180 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            |||:||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish     1 MGNMFAGLFKNLLGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||||||||||||||||||||||||||||||||||:.||||||.||||||||||||||:|||||||
Zfish    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFANKQDL 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNA 180
            |||||||||||||||||||:||||||||||||||||||||||||||||||
Zfish   131 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLKNA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 165/173 (95%)
arf2aNP_958912.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 165/173 (95%)

Return to query results.
Submit another query.