DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arf6.2

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_012823627.1 Gene:arf6.2 / 395051 XenbaseID:XB-GENE-967358 Length:229 Species:Xenopus tropicalis


Alignment Length:177 Identity:118/177 - (66%)
Similarity:146/177 - (82%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 67
            ::...:...:||.|||||||:|||||||||||||||||:.||||||:|||||||.|||:.|.|||
 Frog    53 SIMGKMLSKVFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWD 117

  Fly    68 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPN 132
            ||||||||||||||:..|||||||||..||:||.|||:||.|::.:.|:|||::|||||||||.:
 Frog   118 VGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLAD 182

  Fly   133 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            ||...||.:||||..:|:||||:|.:||.:|:||||||.||::..|:
 Frog   183 AMKPHEIQEKLGLTRIRDRNWYVQPSCANTGEGLYEGLMWLTSNYKS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 117/173 (68%)
arf6.2XP_012823627.1 P-loop containing Nucleoside Triphosphate Hydrolases 55..229 CDD:476819 117/173 (68%)

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