DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arl10

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_989044.1 Gene:arl10 / 394641 XenbaseID:XB-GENE-945631 Length:237 Species:Xenopus tropicalis


Alignment Length:151 Identity:54/151 - (35%)
Similarity:85/151 - (56%) Gaps:5/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 80
            :.:||::|||.|||::|::.:..... .::.||.|||...:.::.:...:.:|||...:|..|..
 Frog    45 DRQILVLGLDGAGKSSIIHAISTNTTRSSSAPTHGFNSAQIIHQGLRIELLEVGGSQNLRTYWSQ 109

  Fly    81 YFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGL 145
            |.:|...::|||||.|.:|:..||:||.|:|  .|..|..|::.|||||...|:...||..:|.|
 Frog   110 YLKNANVIVFVVDSTDNKRLHLARQELHRLL--HEAPDLPLMVLANKQDQNTALCLPEIHSELSL 172

  Fly   146 HSLR-NRNWYIQATCATSGDG 165
            |.:. .|...:..|.|.| ||
 Frog   173 HRITGEREVTLLGTSAVS-DG 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 54/151 (36%)
arl10NP_989044.1 P-loop containing Nucleoside Triphosphate Hydrolases 47..210 CDD:476819 54/149 (36%)

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