DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arl3l2

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_957013.1 Gene:arl3l2 / 393692 ZFINID:ZDB-GENE-040426-1678 Length:187 Species:Danio rerio


Alignment Length:166 Identity:77/166 - (46%)
Similarity:111/166 - (66%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY 81
            |:|||::|||.|||||:|..|...::.|..||.|||::||..:.:...|||:|||.||||.|:.|
Zfish    22 ELRILLLGLDNAGKTTLLKSLASEDVNTITPTQGFNIKTVASRGMKLNVWDIGGQRKIRPFWKKY 86

  Fly    82 FQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLH 146
            .:||..|::|:||.|::|..|...||..::.|:.|....:|||||||||..|..|:||.:.|.||
Zfish    87 LENTDLLVYVIDSADKKRFEETGLELSELIDEENLCGVPVLIFANKQDLGTAAPASEIAEGLNLH 151

  Fly   147 SLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 182
            :.|:|.|.|||..|.:|:|:.:|::|:.|.|.|..:
Zfish   152 TYRDRVWQIQACSAITGEGVQDGMNWICNNLVNRKK 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 76/161 (47%)
arl3l2NP_957013.1 Arl3 8..181 CDD:206721 74/158 (47%)

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