DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and sar1a

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_988845.1 Gene:sar1a / 387599 XenbaseID:XB-GENE-944263 Length:198 Species:Xenopus tropicalis


Alignment Length:189 Identity:55/189 - (29%)
Similarity:99/189 - (52%) Gaps:15/189 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NVFANL--FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            |.|:::  |.||: ||..:::.:|||.|||||:|:.||...:...:||:....|.:....::||.
 Frog    10 NGFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTT 73

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            :|:||.::.|.:|::|.....|::|:||..|..|:.|::.||..::.::.:.:..:||..||.|.
 Frog    74 FDLGGHEQARRVWKNYLPAINGIVFLVDCVDHGRLMESKVELNALMTDETISNVPILILGNKIDR 138

  Fly   131 PNAMNAAEITDKLGLH------------SLRNRNWYIQATCATSGDGLYEGLDWLSNQL 177
            |.|::..::.:..||:            .|..|...:.........|..||..|||..:
 Frog   139 PEAISEEKLREIFGLYGQTTGKGNVPLKDLNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 54/187 (29%)
sar1aNP_988845.1 Sar1 3..197 CDD:206645 55/187 (29%)

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