DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and Arl9

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001405020.1 Gene:Arl9 / 384185 MGIID:1915496 Length:658 Species:Mus musculus


Alignment Length:157 Identity:54/157 - (34%)
Similarity:84/157 - (53%) Gaps:5/157 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKGLFGKKE-MRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEYKNISFTVWDVGG 70
            |:.|...|.| .:||::|||.||||::|:.|....:. :|.||.|.|...:..::......::||
Mouse   480 LWMGGSAKVENKQILVLGLDGAGKTSVLHLLASNRVQHSTAPTQGLNAVHINSEDRQMEFLEIGG 544

  Fly    71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMN 135
            .:..|..|..|......|||||||.|.:|:.||::.|.:::..:.  ...|::|||||||..|.:
Mouse   545 SEPFRSYWEMYLPKGWLLIFVVDSADHKRLPEAKKYLHQLINPNP--GLPLVVFANKQDLEAAYH 607

  Fly   136 AAEITDKLGLHSLRN-RNWYIQATCAT 161
            ..:|.|.|.|..:.| |..::..|..|
Mouse   608 ITDIHDALALSEVGNDRKLFLFGTQVT 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 54/157 (34%)
Arl9NP_001405020.1 PTZ00121 <296..>419 CDD:173412
Arl9_Arfrp2_like 492..657 CDD:133362 50/145 (34%)
Blue background indicates that the domain is not in the aligned region.

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