DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and Arfrp1

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster


Alignment Length:192 Identity:66/192 - (34%)
Similarity:104/192 - (54%) Gaps:18/192 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVE 54
            |..:....:|.:..|.:..::::|||.|||||.|          || |...:|.|   |:|.|:.
  Fly     1 MYTLMHGFYKYMTQKDDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT---TVGLNIG 62

  Fly    55 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDA 119
            |::.:.:....||:|||.:::.||..|:|.:.|:|:|:|||||||:.|::....:|:..:.|...
  Fly    63 TIDVQGVRLNFWDLGGQQELQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGV 127

  Fly   120 VLLIFANKQDLPNAMNAAEIT---DKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 178
            .|||.|||||||:.|...||.   .:.|. .:..|:.......|..|:|:.||:.||...:|
  Fly   128 PLLILANKQDLPDVMGVREIKPVFQQAGA-LIGRRDCLTIPVSALHGEGVDEGIKWLVEAIK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 65/188 (35%)
Arfrp1NP_572526.1 small_GTP 17..181 CDD:272973 60/167 (36%)
Arfrp1 19..186 CDD:206725 62/170 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455830
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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