DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and Arl10

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001386250.1 Gene:Arl10 / 306767 RGDID:1303298 Length:243 Species:Rattus norvegicus


Alignment Length:212 Identity:60/212 - (28%)
Similarity:101/212 - (47%) Gaps:47/212 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGK----------------------------------------KEMRILMVGL 25
            :|:|...|:|..||:                                        ::..:|::||
  Rat    20 LGSVLFILWKAYFGRGRERRWDGGEAWWGADTDRLPQWDEWEPEDDEDEPALEELEQREVLVLGL 84

  Fly    26 DAAGKTTILYKLKLGE--IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
            |.:||:|.| ::..|:  :...:||.|||...:..||....:.::||...:|..|:.:......|
  Rat    85 DGSGKSTFL-RMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYWKEFVNEVDVL 148

  Fly    89 IFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRN- 152
            :|:|||.||.|:..||:||.::|.:|.  |..::|.||||||..||:..|:..:|||.:..|:. 
  Rat   149 VFMVDSTDRLRLPWARQELQKLLDKDP--DLPVVIVANKQDLSGAMSMVELQQELGLLASDNQRE 211

  Fly   153 -WYIQATCATSGDGLYE 168
             :.:.|:.|.:|.|..|
  Rat   212 VFLLAASIAPAGSGFEE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 58/208 (28%)
Arl10NP_001386250.1 P-loop containing Nucleoside Triphosphate Hydrolases 78..236 CDD:476819 54/154 (35%)

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