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Protein Alignment Arf79F and Arl4d
DIOPT Version :9
Sequence 1: | NP_001097667.1 |
Gene: | Arf79F / 40506 |
FlyBaseID: | FBgn0010348 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100522.1 |
Gene: | Arl4d / 303559 |
RGDID: | 1306875 |
Length: | 201 |
Species: | Rattus norvegicus |
Alignment Length: | 174 |
Identity: | 75/174 - (43%) |
Similarity: | 109/174 - (62%) |
Gaps: | 9/174 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPL 77
:.::::|||:||||::||:||..|.|.::||.|||.|.:.. :.|:|.|||||||:|:|||
Rat 22 LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPL 86
Fly 78 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDK 142
||.|.:.|.||:|||||.:.||:.|||.||.|:....:.:...:|:.|||||.|.|::|||:..:
Rat 87 WRSYTRRTDGLVFVVDSAETERLEEARMELHRISKASDNQGVPVLVLANKQDQPGALSAAEVEKR 151
Fly 143 LGLHSLRNRN-WYIQATCATSGDGLYEGLDWLSNQL---KNANR 182
|.:..|.... .::|...|..|.||..||:.|...: |.|.|
Rat 152 LAVRELAAATLTHVQGCSAVDGLGLQPGLEHLYEMILKRKKAPR 195
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Arf79F | NP_001097667.1 |
ARF |
5..179 |
CDD:128474 |
72/169 (43%) |
Arl4d | NP_001100522.1 |
Arl4_Arl7 |
19..201 |
CDD:206719 |
75/174 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0070 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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