DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arl13b

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_775379.2 Gene:arl13b / 286784 ZFINID:ZDB-GENE-021217-3 Length:407 Species:Danio rerio


Alignment Length:190 Identity:63/190 - (33%)
Similarity:101/190 - (53%) Gaps:13/190 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKE----MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI 61
            |.|:.||....|...:|    :.::|||||.||||..:..::....:...||:||:...::....
Zfish     1 MFNLMANCCNWLKRWREPARKVTLVMVGLDNAGKTATVRGIQGESPLDVAPTVGFSKVDLKQGKF 65

  Fly    62 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFAN 126
            ..|::|:||..:||.:|::|:..:.|::|||||:|.:||.|.|:.:..:|....:....:|:.||
Zfish    66 EVTIFDLGGGKRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLAN 130

  Fly   127 KQDLPNAMNAAEITDKLGLHSLRNRN---WYIQATCATSGDG------LYEGLDWLSNQL 177
            |||...||..|:|.:.|.|..|.|.|   ..|:...|..|.|      :..||:||.|.:
Zfish   131 KQDQDGAMAEADIIETLSLEKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 61/186 (33%)
arl13bNP_775379.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..407
Blue background indicates that the domain is not in the aligned region.

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