DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and Arl5c

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_997114.1 Gene:Arl5c / 217151 MGIID:3028577 Length:179 Species:Mus musculus


Alignment Length:176 Identity:80/176 - (45%)
Similarity:118/176 - (67%) Gaps:1/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||.:.|.|.: :||.:|.::::||||.||||||||:....|:|.|..|||.|||.:..:...|.:
Mouse     1 MGQLIAKLMR-IFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHTCSTIGSNVEEIVLRKTHFLM 64

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||:|||:.:|..|..|:.|.:.:|.|:||.||.|:...||||.:|||.:.|::|.:||||||||:
Mouse    65 WDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQDV 129

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQ 176
            .::|..|||:..|.|.::::..|:||..||.:|:||..||.|:..|
Mouse   130 KDSMTTAEISQFLTLSAIKDHPWHIQGCCALTGEGLPAGLQWMQAQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 78/172 (45%)
Arl5cNP_997114.1 Arl5_Arl8 3..172 CDD:133353 76/169 (45%)
Gem1 18..>138 CDD:224025 57/119 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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