DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and warf-1

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_501242.1 Gene:warf-1 / 191609 WormBaseID:WBGene00000190 Length:179 Species:Caenorhabditis elegans


Alignment Length:178 Identity:111/178 - (62%)
Similarity:133/178 - (74%) Gaps:0/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            ||..|:.:...:|...|.|.||:|||.||||||||||||.|.|.||||||||||||.::.|:.||
 Worm     1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||||||.|||.||::||.||..|:|||||:|.|||.||:|||..:|||.||.|:.||:||||||:
 Worm    66 WDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDM 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 178
            |||.:.||:|..|.|.||:||.|:|..|.|.||.||||||.|:..|:|
 Worm   131 PNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 109/174 (63%)
warf-1NP_501242.1 Arf_Arl 19..176 CDD:206644 104/156 (67%)

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