DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf79F and arl-6

DIOPT Version :9

Sequence 1:NP_001097667.1 Gene:Arf79F / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_497993.1 Gene:arl-6 / 183311 WormBaseID:WBGene00000193 Length:190 Species:Caenorhabditis elegans


Alignment Length:183 Identity:77/183 - (42%)
Similarity:116/183 - (63%) Gaps:8/183 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLF--GKKEMRILMVGLDAAGKTTILYKLKLGEIVT--TIPTIGFNVETVEYKNI 61
            ||  |.:....||  |||::.|::||||.:||||||.:||..|..:  .:||:|..|.....:|:
 Worm     1 MG--FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNL 63

  Fly    62 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDEL--RDAVLLIF 124
            ||..:|:.||.|.|..|..||.::||:|||:||:||.|:...::|||.::...::  |...::|.
 Worm    64 SFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVIL 128

  Fly   125 ANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 177
            |||.|:|.||.|::||..|||:..|:..|.|.:|||.:||||.:.:..||.::
 Worm   129 ANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf79FNP_001097667.1 ARF 5..179 CDD:128474 75/179 (42%)
arl-6NP_497993.1 small_GTP 17..173 CDD:272973 67/155 (43%)
Arl6 19..180 CDD:206722 69/160 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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