DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and arl-8

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_502791.1 Gene:arl-8 / 178405 WormBaseID:WBGene00000192 Length:185 Species:Caenorhabditis elegans


Alignment Length:179 Identity:56/179 - (31%)
Similarity:102/179 - (56%) Gaps:1/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEYKNISFT 64
            |.|...:..:.||.|:||.:.:|||..:||||.:..:..|:.. ..|||:|||:..:...|::..
 Worm     4 MVNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIK 68

  Fly    65 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQD 129
            :||:|||.:.|.:|..|.:....::|:||:.|.|::..:|.|||::|.:.:|....:|:..||:|
 Worm    69 LWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKD 133

  Fly   130 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 178
            ||.|::..::.:::.|.|::||.....:......:.:...|.||.:..|
 Worm   134 LPGALDERQLIERMNLSSIQNREICCYSISCKEKENIDITLQWLIDHSK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 54/175 (31%)
arl-8NP_502791.1 Arl10_like 22..180 CDD:206724 48/157 (31%)

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