DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and sar-1

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_500582.1 Gene:sar-1 / 177217 WormBaseID:WBGene00022678 Length:193 Species:Caenorhabditis elegans


Alignment Length:189 Identity:59/189 - (31%)
Similarity:91/189 - (48%) Gaps:33/189 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 75
            ||..||. :::.:|||.|||||:|:.||...|...:||:....|.:....||||.:|:||..:.|
 Worm    16 GLANKKG-KLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQAR 79

  Fly    76 PLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEIT 140
            .:|:.||.....::|::|..|.||:.|:|.||..:|.::::....:||..||.|.|.|::..::.
 Worm    80 RVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLK 144

  Fly   141 DKLGLHSLRNRNWYIQATCATSGD----------------------GLYEGLDWLSNQL 177
            .:|.          ||..|...||                      |..||:.||...|
 Worm   145 WQLN----------IQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 59/189 (31%)
sar-1NP_500582.1 Sar1 3..193 CDD:206645 58/187 (31%)

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