DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and Y54E10BR.2

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_491094.1 Gene:Y54E10BR.2 / 171878 WormBaseID:WBGene00021841 Length:191 Species:Caenorhabditis elegans


Alignment Length:188 Identity:51/188 - (27%)
Similarity:91/188 - (48%) Gaps:15/188 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI----------VTTIPTIGFNVET 55
            |..:.|.:::..|.||:..:::||||.|||||.|.:.|...:          :|.  |:|.|...
 Worm     1 MYTLSAGIWEKFFKKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITA--TVGLNTGN 63

  Fly    56 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAV 120
            ||..|.....||:|||:.:|.||..|:.:...:|||||:...:.......:...::|.:.:::..
 Worm    64 VELNNTCLHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIP 128

  Fly   121 LLIFANKQDLPNAMNAAEITDKLGLHSLRNR-NWYIQATCATSGDGLYEGLDWLSNQL 177
            :|:..||.::..|..|||:  ::.|....:| :..:....|..|..:...:.|:...|
 Worm   129 VLVAVNKSEMEGAAAAAEV--RMLLEDDNHRSDLAVLPVSALEGTNIERCVHWIVRSL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 50/184 (27%)
Y54E10BR.2NP_491094.1 Arfrp1 19..183 CDD:206725 45/167 (27%)

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