DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and Arf3

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_543180.1 Gene:Arf3 / 140940 RGDID:621273 Length:181 Species:Rattus norvegicus


Alignment Length:179 Identity:169/179 - (94%)
Similarity:174/179 - (97%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
            |||:|.||.|.|.||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDL 130
            ||||||||||||||||||||||||||||||||||:.|||||||||||||||||||||:|||||||
  Rat    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDL 130

  Fly   131 PNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            |||||||||||||||||||:|||||||||||||||||||||||:|||||
  Rat   131 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 164/173 (95%)
Arf3NP_543180.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 164/173 (95%)

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