DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and ARL8A

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_620150.1 Gene:ARL8A / 127829 HGNCID:25192 Length:186 Species:Homo sapiens


Alignment Length:178 Identity:56/178 - (31%)
Similarity:102/178 - (57%) Gaps:1/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVW 66
            |...:.||.||.|:||.:.:|||..:||||.:..:..|:. ...|||:|||:..:...|::..:|
Human     6 NKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLW 70

  Fly    67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLP 131
            |:|||.:.|.:|..|.:....::::||:.|:|:|..::.||..:|.:.:|:...:|:..||:|||
Human    71 DIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLP 135

  Fly   132 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            .|::..|:.:|:.|.::::|.....:......|.:...|.||....|:
Human   136 GALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKS 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 54/174 (31%)
ARL8ANP_620150.1 Arl10_like 22..180 CDD:206724 47/157 (30%)

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