DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and LOC1274642

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_313793.6 Gene:LOC1274642 / 1274642 VectorBaseID:AGAMI1_001491 Length:179 Species:Anopheles gambiae


Alignment Length:164 Identity:77/164 - (46%)
Similarity:112/164 - (68%) Gaps:0/164 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR 79
            :||:|||::|||.|||||:|.:|...|:....||.|||:::|........|||:|||.||||.|:
Mosquito    15 EKELRILLLGLDNAGKTTLLKQLASEEVTQVTPTAGFNIKSVVSDGFKLNVWDIGGQSKIRPYWK 79

  Fly    80 HYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLG 144
            :||:||..||:|:||:|::|:.|..:||..:|.:|:|:...||:||||||:..|:.|:||.:.|.
Mosquito    80 NYFENTDVLIYVIDSSDKKRLEETGDELTELLLDDKLKSVPLLVFANKQDVVGALKASEIAECLK 144

  Fly   145 LHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 178
            |..|.:|.|.||...|..|.|:.||:||:...:|
Mosquito   145 LVKLMDRTWQIQGCSALQGTGVKEGMDWVCKSIK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 77/164 (47%)
LOC1274642XP_313793.6 None

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