DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf1 and Arl14

DIOPT Version :10

Sequence 1:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001386692.1 Gene:Arl14 / 103690167 RGDID:9465124 Length:192 Species:Rattus norvegicus


Alignment Length:167 Identity:74/167 - (44%)
Similarity:119/167 - (71%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQDKIRPLWR 79
            |:..||::|||:|||:|:||:||..|.:.||||||||||.|:.:: ::.||||:|||:|:|.:|.
  Rat    12 KQAHILLLGLDSAGKSTLLYRLKFAETLATIPTIGFNVEMVQLQSGLALTVWDIGGQEKMRTVWD 76

  Fly    80 HYFQNTQGLIFVVD-SNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKL 143
            .|.:|..||::||| |..::|:.::|:|...:|..:.:::..::|.|||||||.|::|.:||...
  Rat    77 CYCENAHGLVYVVDCSEGQKRLEDSRKEFKHILKNEHIKNTPVVILANKQDLPGALSAEDITRMF 141

  Fly   144 GLHSL-RNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
            .:..| .:||||:|..||.:|:||.:|...|:..:|:
  Rat   142 KVKKLCSDRNWYVQPCCAVTGEGLDDGFRKLTEFVKS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf1NP_476955.1 ARF 5..179 CDD:128474 73/165 (44%)
Arl14NP_001386692.1 ARLTS1 15..175 CDD:133356 72/159 (45%)

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