DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC4 and AT5G10780

DIOPT Version :10

Sequence 1:NP_649424.1 Gene:EMC4 / 40505 FlyBaseID:FBgn0037199 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_001078568.1 Gene:AT5G10780 / 830945 AraportID:AT5G10780 Length:187 Species:Arabidopsis thaliana


Alignment Length:165 Identity:49/165 - (29%)
Similarity:87/165 - (52%) Gaps:21/165 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KWALDFNGS----KNADIPSPLGYNPSALVNQSEVVRDQR------LVIKKSWDLALGPLKNIPM 65
            :||::|:..    .:.||..|.|::.::..........|:      ..::|:|::|..|.||:.|
plant    13 RWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWKLQKAWEVAQSPFKNLMM 77

  Fly    66 NLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTG-----QRIVYFLGNLAN 125
            ..|:|:|:||::.:|.|.:....|.:||.|:   |...|:.|..:...     .::|:...||..
plant    78 MGFMMWMAGNTVHLFSIGITFSALWQPISAL---QSVGKIFEPFKDNKVELLMPKLVFLALNLGG 139

  Fly   126 VALALYKCQSMGLLPTHASDWLAFVQP---QTRLE 157
            :||.::|..::||||||||||::.:.|   .||.|
plant   140 LALGVWKLNTLGLLPTHASDWVSSLPPPQLNTRAE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC4NP_649424.1 DUF1077 43..152 CDD:461902 38/119 (32%)
AT5G10780NP_001078568.1 DUF1077 51..166 CDD:461902 38/117 (32%)

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