DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and Atp13a3

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:XP_038944543.1 Gene:Atp13a3 / 678704 RGDID:1590881 Length:1249 Species:Rattus norvegicus


Alignment Length:1072 Identity:238/1072 - (22%)
Similarity:426/1072 - (39%) Gaps:233/1072 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 YRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVSVIMKQFDDAVSITIAILIVVTVA 202
            ||..:.|.|| :.|.....:|..|::..||..:.    .|.|||:...|:.....:||:::..|:
  Rat   182 YRKLLYGVNE-IAVKVPSVFKLLIKEVLNPFYIF----QLFSVILWSIDEYYYYALAIVVMSIVS 241

  Fly   203 FIQE-YRSEKSLEELKKLVPPECH-----CLREGRLDTFLARELVPGD--IVHLNVGDRVPADVR 259
            .|.. |...|....|..:|.....     |.....::...:.:|||||  |:.|| |..:|.|..
  Rat   242 IISSLYSIRKQYVMLHDMVATHSTVRVSVCRVNEEIEEIFSTDLVPGDVMIIPLN-GTVMPCDAV 305

  Fly   260 LFEAVDLSIDESSFTGETEPARKITDVLLNNTNV----------KDHSNMKNIAFMGTLV---RC 311
            |.....: ::||..|||:.|   :|...|.|.:|          ...::.::..|.||.|   |.
  Rat   306 LINGTCI-VNESMLTGESVP---VTKTNLPNPSVDVKGMGEEQYSPETHKRHTLFCGTTVIQTRF 366

  Fly   312 GNG---KGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMDILGAQLSFYSFLIIGVIML-LGW- 371
            ..|   |.|||.||..:..|::.:.:...:.....|.:..         |.||:..|::. :|: 
  Rat   367 YTGELVKAIVVRTGFSTSKGQLVRSILYPKPTDFKLYRDA---------YLFLLCLVVVAGIGFI 422

  Fly   372 -------LQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGC 429
                   |..|.:.|:...|:.:....:|..||..:|..:.....|:.|..........:...|.
  Rat   423 YTIVNSILNEKEVQEIIIKSLDIITITVPPALPAAMTAGIVYAQRRLKKVGIFCISPQRINICGQ 487

  Fly   430 VNVICSDKTGTLTKNEMTATIIITSDGYMADVTGAGYNDQGEIHIRHCNNVE--MAKTNITNLLE 492
            :|::|.|||||||:           ||  .|:.|          |:...|..  :.:.|:.|.:.
  Rat   488 LNLVCFDKTGTLTE-----------DG--LDLWG----------IQRVENTRFLLPEDNVCNEML 529

  Fly   493 IG-------AVCNNAYIQNGTLLGQP-------------TEGALVAVAMKNGMYATAENYVR--- 534
            :.       |.|::.....|.|.|.|             .|......|:.|.:..|.   ||   
  Rat   530 VKSQFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWVLEEATEEETALHNRIMPTV---VRPSK 591

  Fly   535 ---------------------------IQEYPFSSEQKMMAVKCIHKYNNNKEEIFFAKGALETL 572
                                       ::::||||..:.|:|  :.:...:|....:.|||.|.:
  Rat   592 QLLPESTTAGDQEMELFELPAIYEIGIVRQFPFSSALQRMSV--VARTLGDKRMDAYMKGAPEVI 654

  Fly   573 LPQCTKYQFGTQTVPLTKQNEAEFLAEAYEIGRKGLRVLALAKGRSMQ----------------- 620
            ...|.     .:|||:    :.|.:.|.|.  ::|.||:|||. |.::                 
  Rat   655 ASLCK-----PETVPV----DFEKVLEDYT--KQGFRVIALAH-RKLESKLTWHKVQHVSRDAIE 707

  Fly   621 -DLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAI--DPSRRL---QAVPTHA 679
             ::.:.||:.:.:..:......:|.|.::.:|..|||||...||:::  |....|   :.:...|
  Rat   708 NNMDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDNMLTAVSVARDCGMILPQDKVIIAEA 772

  Fly   680 IPAWPTAGGVPLCSASACCS-TNCLENAMKEIYLTALAQQGLPLVTANLIGIDTI-------HHQ 736
            :|  |..|.|...:.....| |.|.|:       :|:..:.:|:..|:    |::       :|.
  Rat   773 LP--PKDGKVAKINWHYTDSLTQCSES-------SAIDSEAIPIKLAH----DSLEDLQVTRYHF 824

  Fly   737 TLSGQEMDQMNEHQLD---KVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKK 798
            .::|:....:.||..|   |:..:.:||.|::|..|.::|::||.....|||.|||.||..|||:
  Rat   825 AMNGKSFSVILEHFQDLVPKLMLHGTVFARMAPDQKTQLVEALQNVDYFVGMCGDGANDCGALKR 889

  Fly   799 ADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIAL 863
            |..||::.:....|   |:...........:...|.||:...  :.:|..|:.....:.:...::
  Rat   890 AHGGISLSEFEASV---ASPFTSKTPSISCVPNLIREGRAAL--MTSFCVFKFMALYSIIQYFSV 949

  Fly   864 ATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQK-PRNVKQPMITKSVVVNVLLSA 927
            ..|..|.:.|...|.|:|::.:......::.:.|...:::.|: |..:....:..||:..:::|.
  Rat   950 TLLYSILSNLGDFQFLFIDLAIILVVVFTMSLNPAWKELVAQRPPSGLISGALLFSVLSQIVISV 1014

  Fly   928 SIIVLGTLWVFQREMAD--GTLGKTKRDTTMTFTCFVFFDMFNAL---SCRSQTKSVFTIGLTTN 987
            ....||..||.|.:..|  ..:..|.|.     .|:....::|..   ||:.|.....|:...::
  Rat  1015 GFQSLGFFWVKQYKECDPYSEVCNTTRS-----ACWNSSHLYNGTELDSCKIQNYENTTVFFISS 1074

  Fly   988 RMFL-LAVAFS--------------IIGQMLVVY----FPPLQMVFQTEAL-----TPYD--IFF 1026
            ..:| :|||||              .:..::::|    |..|..|...:.|     .||.  |:.
  Rat  1075 FQYLTVAVAFSKGKPFRQPCYKNYFFVISVIILYVFILFIMLHPVASVDQLLEIMCVPYQWRIYM 1139

  Fly  1027 LVSLTSSVLVVSEIKKWFERTMERKMYSTRSE 1058
            |:.:.::..|...::.:|..|:..|:..:|.:
  Rat  1140 LIIVLTNAFVSITVESFFLDTVLWKVVFSRDK 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 236/1061 (22%)
Cation_ATPase_N 112..179 CDD:279080 11/40 (28%)
E1-E2_ATPase 191..425 CDD:278548 60/266 (23%)
Cation_ATPase 496..579 CDD:289987 23/125 (18%)
COG4087 <760..823 CDD:226572 24/62 (39%)
Cation_ATPase_C 872..1044 CDD:279079 40/203 (20%)
Atp13a3XP_038944543.1 P-ATPase-V 14..1142 CDD:273738 233/1041 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334763
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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