DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPoCk and atp1a1a.3

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_571763.1 Gene:atp1a1a.3 / 64614 ZFINID:ZDB-GENE-001212-3 Length:1024 Species:Danio rerio


Alignment Length:1103 Identity:309/1103 - (28%)
Similarity:491/1103 - (44%) Gaps:220/1103 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLSTSESSTH--SASEVAGRLQVDVRTG 130
            |.||    |:.|:.||                     |....|...|  :..|::.:...|:..|
Zfish    24 KKGK----KNKKDMDE---------------------LKKEVEMDDHKLTLEELSRKYGTDLNKG 63

  Fly   131 LKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQ-FRNPLILLLLGSAL------VSVIMKQ--FD 186
            |..|.||......|.|.|......|.|.|:..| |.....||.:|:.|      :....::  .:
Zfish    64 LSITRAKEILARDGPNALTPPVTTPEWVKFCRQLFGGFQTLLWIGALLCFFAYSIQAASEEEPAN 128

  Fly   187 DAVSITIAILIVVTV----AFIQEYRSEKSLEELKKLVPPECHCLREGRLDTFLARELVPGDIVH 247
            |.:.:.:.:..||||    ::.||.:|.:.::..:.|||.:...:|||......|.::|.||:|.
Zfish   129 DNLYLGLVLAFVVTVNGCFSYYQEAKSSRIMDSFRNLVPQKALVVREGEKSVIDAEDVVVGDLVE 193

  Fly   248 LNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNMKNIAFMGTLVRCG 312
            :..|||:|||:|:..:....:|.||.|||:||..:..::..:|.     ...:||||..|....|
Zfish   194 VKGGDRIPADIRIVSSQGCKVDNSSLTGESEPQTRAPEMSSDNP-----LETRNIAFFSTNCVDG 253

  Fly   313 NGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMD-----ILGAQLSF-YSFLIIGVIMLLGW 371
            ..:|:||:||:|:..|.:..:..:.|..:||:.:.::     |.|..:.. .:||::.:|:...|
Zfish   254 AARGVVVNTGDRTVMGRIASLASSLEGGQTPIAREIEHFIHIITGVAVFLGLTFLVLSLILGYNW 318

  Fly   372 LQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVICSD 436
            |:|    .:|.|.:  .||.:|||||..|||.|.|...||||:|.:||.|..|||||....||||
Zfish   319 LEG----VIFLIGI--IVANVPEGLPATVTVCLTLTAKRMAKKNCLVKNLEAVETLGSTTTICSD 377

  Fly   437 KTGTLTKNEMT-ATIIITSDGYMADV----TGAGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAV 496
            ||||||:|.|| |.:...:..::||.    |||.:              :.:....:.|..:..:
Zfish   378 KTGTLTQNRMTVAHMWFDNHIHIADTTENQTGASF--------------DRSSATWSALARVAGL 428

  Fly   497 CNNAYIQNG---------TLLGQPTEGALV-AVAMKNGMYA-TAENYVRIQEYPFSSEQKMMAVK 550
            ||.|..|:.         ...|..:|.||: .:.:..|..| ..|||.::.|.||:|..|...  
Zfish   429 CNRAVFQSNQSHIPVLKRDTAGDASESALLKCIELSCGSVAEMRENYTKLAEIPFNSTNKYQV-- 491

  Fly   551 CIHKYNNNKE--EIFFAKGALETLLPQCTKYQFGTQTVPLTKQNEAEFLAEAYEIGRKGLRVLAL 613
            .|||..|:.|  .:...|||.|.:|.:|:......:..|:..:.:..|.....|:|..|.|||..
Zfish   492 SIHKNPNSSEPKHLLVMKGAPERILERCSTIFIQGKEQPMDDEMKDAFQNAYLELGGLGERVLGF 556

  Fly   614 A----------KGRSM---------QDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDA 659
            .          :|.:.         ::|.:.||:.:.||||..|.:::.....:|::|.||||| 
Zfish   557 CHFCLPDDQFPEGFAFDTEEMNFPTENLCFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGD- 620

  Fly   660 QETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVT 724
                              |.|.|...|.||.:.|.                     ..:.:..:.
Zfish   621 ------------------HPITAKAIAKGVGIISE---------------------GNETVDDIA 646

  Fly   725 ANL-IGIDTIHHQ-----TLSGQEMDQMNEHQLDKVANNVS--VFYRVSPRHKLEIVKSLQRSGN 781
            |.| |.||.::.:     .:.|.|:..|.:.|||.|..:.:  ||.|.||:.||.||:..||.|.
Zfish   647 ARLKIHIDEVNPRDAKACVIHGGELKNMTDEQLDDVLQHHTEIVFARTSPQQKLIIVEGCQRQGA 711

  Fly   782 IVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNF 846
            ||.:|||||||..||||||||:|||..|:||.|:||||||::|:|.:|:..:|||:.||.|::..
Zfish   712 IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKS 776

  Fly   847 VRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVK 911
            :.:.|::.|..::...:..|:.|..||..:.||.|::..|..||.||..|..:.|::|::|||. 
Zfish   777 IAYTLTSKIPEMSPFLMFVLVGIPLPLGTVTILCIDLGTDMVPAISLAYETAESDIMKRQPRNA- 840

  Fly   912 QPMITKSVVVNVLLSAS----------------IIVL---------------------------- 932
               .|..:|...|:|.|                .::|                            
Zfish   841 ---ATDRLVNERLISVSYGQIGMIQAVGGFFTYFVILAENGFLPYDLVGIRVGWEDRFLNDLEDS 902

  Fly   933 -GTLWVFQ-REMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVFTIGLTTNRMFLLAVA 995
             |..|.:: |::.:.|.      .|..|...|.....:.|.|:::..|:|..|: .||:....:.
Zfish   903 YGQQWTYESRKIVEYTC------HTAFFASIVIVQWTDLLICKTRRLSIFQQGM-KNRVLTFGLL 960

  Fly   996 FSIIGQMLVVYFPPLQMVFQTEALTPYDIFFLVSLTSSVLVVSEIKKWFERT-----MERKMY 1053
            ........:.|.|.:::..:...|.|...|.....:..:.:..|::|:..|.     :||:.|
Zfish   961 EETALAAFLSYCPGMEVAVRMYPLKPLWWFCAFPYSLLIFIYDEVRKYILRRNPGGWVERETY 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 298/1055 (28%)
Cation_ATPase_N 112..179 CDD:279080 20/75 (27%)
E1-E2_ATPase 191..425 CDD:278548 80/243 (33%)
Cation_ATPase 496..579 CDD:289987 29/95 (31%)
COG4087 <760..823 CDD:226572 42/62 (68%)
Cation_ATPase_C 872..1044 CDD:279079 43/217 (20%)
atp1a1a.3NP_571763.1 ATPase-IIC_X-K 32..1024 CDD:273445 304/1091 (28%)
Cation_ATPase_N 41..115 CDD:214842 21/73 (29%)
E1-E2_ATPase 135..366 CDD:278548 80/241 (33%)
Cation_ATPase 428..522 CDD:289987 29/95 (31%)
COG4087 604..753 CDD:226572 68/188 (36%)
Cation_ATPase_C 800..1009 CDD:279079 43/219 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.