DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and atp1a3a

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_571759.2 Gene:atp1a3a / 64610 ZFINID:ZDB-GENE-001212-7 Length:1023 Species:Danio rerio


Alignment Length:1100 Identity:312/1100 - (28%)
Similarity:493/1100 - (44%) Gaps:210/1100 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DSRAVPQNVKPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLSTSESSTHSASEVAGRL 123
            |.:..|:..|.||  |:.|.|:.                :.||...:         |..||..:.
Zfish    18 DDKESPKKGKGGK--DLDDLKKE----------------VPLTEHKM---------SIEEVCRKY 55

  Fly   124 QVDVRTGL-KWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQ-FRNPLILLLLGSA---LVSVIMK 183
            ..|:..|| ....|:|.|: .|.|.|......|.|.|:..| |....|||.:|:.   |...|..
Zfish    56 NTDIVQGLTNARAAEYLAR-DGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYAIQA 119

  Fly   184 QFDDA-------VSITIAILIVVT--VAFIQEYRSEKSLEELKKLVPPECHCLREGRLDTFLARE 239
            ..:|.       :.|.::.::::|  .::.||.:|.|.:|..|.:||.:...:|||......|.|
Zfish   120 ATEDEPAGDNLYLGIVLSAVVIITGCFSYFQEAKSSKIMESFKNMVPQQALVIREGEKLQINAEE 184

  Fly   240 LVPGDIVHLNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSN---MKN 301
            :|.||:|.:..|||:|||:|:..|....:|.||.|||:||..:..|.        .|.|   .:|
Zfish   185 VVGGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPDC--------THDNPLETRN 241

  Fly   302 IAFMGTLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMD-----ILGAQLSF-YSF 360
            |||..|....|..:||||.||:|:..|.:..:....|..|||:.|.::     |.|..:.. .:|
Zfish   242 IAFFSTNCVEGTARGIVVCTGDRTVMGRIATLTSGLETGKTPIAKEIEHFIHIITGVAVFLGVTF 306

  Fly   361 LIIGVIMLLGWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVE 425
            .|:.:|:...||      |.....:.:.||.:||||...|||.|.|...|||::|.:||.|..||
Zfish   307 FILSIILGYSWL------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVE 365

  Fly   426 TLGCVNVICSDKTGTLTKNEMT-ATIIITSDGYMADVTGAGYNDQGEIHIRHCNNVEMAKTNITN 489
            |||..:.||||||||||:|.|| |.:...:..:.||.|    .||........:...:|      
Zfish   366 TLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT----EDQSGASFDKSSGTWLA------ 420

  Fly   490 LLEIGAVCNNAYIQNG---------TLLGQPTEGALV-AVAMKNG-MYATAENYVRIQEYPFSSE 543
            |..:.|:||.|..:.|         .:.|..:|.||: .:.:..| :.|..:...::.|.||:|.
Zfish   421 LARVAALCNRAVFKAGQESLPILKRDVAGDASESALLKCIELSCGSVKAMRDKNKKVAEIPFNST 485

  Fly   544 QKMMAVKCIHKYNNNKEE--IFFAKGALETLLPQC-TKYQFGTQTVPLTKQNEAEFLAEAYEIGR 605
            .|...  .:|:.:.::|.  :...|||.|.:|.:| |..|.|.:. |:.::.:..|.....|:|.
Zfish   486 NKYQL--SVHELDESEENHYLLVMKGAPERILDRCSTILQQGKEQ-PMDEELKEAFQNAYLELGG 547

  Fly   606 KGLRVLALA----------KGRSM---------QDLIYCGLVGITDPPRPLVRESIEMLMQSGVR 651
            .|.|||...          ||.:.         .:|.:.||:.:.||||..|.:::.....:|::
Zfish   548 LGERVLGFCHLVMPGDKYPKGFAFDTDDINFQTDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIK 612

  Fly   652 VKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALA 716
            |.|||||                   |.|.|...|.||.:.|..        ...:::|    .|
Zfish   613 VIMVTGD-------------------HPITAKAIAKGVGIISEG--------NETVEDI----AA 646

  Fly   717 QQGLPLVTANLIGID--TIHHQTLSGQEMDQMNEHQLDKVANNVS--VFYRVSPRHKLEIVKSLQ 777
            :..:|:...|.....  .||     |.::..:::.|:|:|..|.:  ||.|.||:.||.||:..|
Zfish   647 RLNIPVSQVNPRDAKACVIH-----GTDLKDLSQDQMDEVLKNHTEIVFARTSPQQKLIIVEGCQ 706

  Fly   778 RSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYN 842
            |.|.||.:|||||||..||||||||:|||.:|:||.|:||||||::|:|.:|:..:|||:.||.|
Zfish   707 RQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDN 771

  Fly   843 IRNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKP 907
            ::..:.:.|:::|..:.......|::|..||..:.||.|::..|..||.||..|..:.|::|::|
Zfish   772 LKKSIAYTLTSNIPEITPFLFFILVNIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQP 836

  Fly   908 RNVKQPMITKSVVVNV------LLSA------------------SIIV----------------- 931
            ||..:..:....::::      ::.|                  |::|                 
Zfish   837 RNPLRDKLVNERLISIAYGQIGMIQALGGFFSYFVILAENGFLPSVLVGIRLNWDDRSNNDLEDS 901

  Fly   932 LGTLWVF-QREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVFTIGLTTNRMFLLAVA 995
            .|..|.: ||::.:.|.      .|..|...|.....:.:.|:::..|||..|: .|::.:..:.
Zfish   902 YGQQWTYEQRKIVEFTC------HTAFFVSIVVVQWADVIICKTRRNSVFQQGM-KNKILIFGLF 959

  Fly   996 FSIIGQMLVVYFPPLQMVFQTEALTPYDIFFLVSLTSSVLVVSEIKK---------WFER 1046
            ........:.|.|.:.:..:...|.|...|.....:..:.|..||:|         |.|:
Zfish   960 EETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEK 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 302/1048 (29%)
Cation_ATPase_N 112..179 CDD:279080 22/71 (31%)
E1-E2_ATPase 191..425 CDD:278548 83/244 (34%)
Cation_ATPase 496..579 CDD:289987 24/96 (25%)
COG4087 <760..823 CDD:226572 42/62 (68%)
Cation_ATPase_C 872..1044 CDD:279079 42/222 (19%)
atp1a3aNP_571759.2 ATPase-IIC_X-K 30..1023 CDD:273445 308/1087 (28%)
Cation_ATPase_N 41..114 CDD:214842 23/82 (28%)
E1-E2_ATPase 134..365 CDD:278548 83/244 (34%)
Cation_ATPase 427..521 CDD:289987 23/95 (24%)
COG4087 606..752 CDD:226572 67/181 (37%)
Cation_ATPase_C 799..1008 CDD:279079 42/215 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573948
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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