DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPoCk and atp2a1

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:XP_012810385.1 Gene:atp2a1 / 613090 XenbaseID:XB-GENE-975115 Length:996 Species:Xenopus tropicalis


Alignment Length:1060 Identity:338/1060 - (31%)
Similarity:513/1060 - (48%) Gaps:191/1060 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 THSASEVAGRLQVDVRTGLKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGSAL 177
            |.:..|......|:..|||.....|......|.|||........|:...|||.:.|:.:||.:|.
 Frog     6 TKTTEECLAYFGVNENTGLSPEIVKKNFDKFGPNELPAEEGKSIWELVAEQFEDLLVRILLLAAC 70

  Fly   178 VSVIMKQFDDA-------VSITIAILIVVTVAFI---QEYRSEKSLEELKKLVPPECHCLREGR- 231
            :|.::..|::.       |...:.:||::..|.:   ||..:|.::|.||:..|......|..| 
 Frog    71 ISFVLAWFEEGEETVTAFVEPFVILLILIANAVVGVWQERNAEDAIEALKEYEPEMGKVYRSDRK 135

  Fly   232 -LDTFLARELVPGDIVHLNVGDRVPADVRL--FEAVDLSIDESSFTGETEPARKITDVLLNNTNV 293
             :....|||:||||||.:.|||:||||:||  .::..|.||:|..|||:....|.|:.:.:...|
 Frog   136 SVQRIKAREIVPGDIVEVAVGDKVPADIRLISIKSTTLRIDQSILTGESVSVIKHTEAVPDPRAV 200

  Fly   294 KDHSNMKNIAFMGTLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMDILGAQLSFY 358
              :.:.||:.|.||.|..|...|:|::||..:|.|::...|.|.|..|||||:.:|..|.|||..
 Frog   201 --NQDKKNMLFSGTNVGAGKAIGVVIATGPNTEIGKIRDEMAATEQEKTPLQQKLDEFGEQLSKV 263

  Fly   359 SFLIIGVIMLL------------GWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRM 411
            ..||...:.|:            .|::|  ....|.|:|:|||||||||||.|:|..||||..||
 Frog   264 ISLICVAVWLINIGHFNDPIHGGSWIKG--AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM 326

  Fly   412 AKRNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMAD--------VTGAGYND 468
            ||:|:||:.||:||||||.:|||||||||||.|:|:...:...|....|        :||:.|..
 Frog   327 AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVLDKVDGDICSLNEFSITGSTYAP 391

  Fly   469 QGEIHIRHCNNVEMAK-TNITNLLEIGAVCNNAYI----QNGTL--LGQPTEGALVAVAMKNGMY 526
            :||: :::..:|:..: ..:..|..|.|:||::.:    ..|..  :|:.||.||..:..|..::
 Frog   392 EGEV-LKNDKSVKAGQYDGLVELATICALCNDSSLDYNESKGVFEKVGEATETALTTLVEKMNVF 455

  Fly   527 ------------ATAENYVRIQ----EY--PFSSEQKMMAVKCI-----HKYNNNKEEIFFAKGA 568
                        |.|.|.|..|    |:  .||.::|.|:|.|.     .....||   .|.|||
 Frog   456 NTEVRSLSKVERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGNK---MFVKGA 517

  Fly   569 LETLLPQCTKYQFGTQTVPLTKQNEAEFLA--EAYEIGRKGLRVLALA------KGRSM------ 619
            .|.::.:|...:.||..||||...:.:.|.  :.:..||..||.||||      |...|      
 Frog   518 PEGVIDRCNYVRVGTTRVPLTPAIKDKILTVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDAT 582

  Fly   620 ------QDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTH 678
                  .||.:.|.||:.||||..|..||::..::|:||.|:|||.:.||:||  .||       
 Frog   583 KFVDYETDLTFVGCVGMLDPPRKEVMGSIKLCREAGIRVIMITGDNKGTAIAI--CRR------- 638

  Fly   679 AIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGI----DTIHHQTLS 739
                                                             |||    |.:.....:
 Frog   639 -------------------------------------------------IGIFGEDDDVSRCAFT 654

  Fly   740 GQEMDQMNEHQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIA 804
            |:|.|.:...:..:.....|.|.||.|.||.:||:.||....|..||||||||..|||||:||||
 Frog   655 GREFDDLPPTEQREACKRASCFARVEPTHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIA 719

  Fly   805 MGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDI 869
            || :||.|.|.|::|:|.:|:|.||:||:|||:.|:.|::.|:|:.:|:::..:..|.|...:.:
 Frog   720 MG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL 783

  Fly   870 ANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMITKSVVVNVLLSASIIVLGT 934
            ...|..:|:||:|::.||.||.:||..|.|.|::.:.||:.|:|:|:..:....|.....:...|
 Frog   784 PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYLAIGGYVGAAT 848

  Fly   935 L----WVFQ--------------------REMAD-----GTLGKTKRDTTMTFTCFVFFDMFNAL 970
            :    |.|.                    .|.||     ..:.::....||..:..|..:|.|||
 Frog   849 VGAAAWWFMYADDGPEVTFYQLSHFMQCTEENADFEGLECEIFESPVPMTMALSVLVTIEMCNAL 913

  Fly   971 SCRSQTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYFPPLQMVFQTEALTPYDI---FFLVSLTS 1032
            :..|:.:|:..:....|...|.::..|:....|::|..||.|:|:   |||.:.   |.::.::.
 Frog   914 NSLSENQSLVRMPPWVNIWLLGSICLSMSLHFLILYVEPLPMIFK---LTPLNFTQWFVVLKISI 975

  Fly  1033 SVLVVSEIKKWFERT-MERK 1051
            .|:::.|:.|:..|. :|.|
 Frog   976 PVILLDELLKFVARNYLEEK 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 336/1056 (32%)
Cation_ATPase_N 112..179 CDD:279080 19/65 (29%)
E1-E2_ATPase 191..425 CDD:278548 100/252 (40%)
Cation_ATPase 496..579 CDD:289987 29/111 (26%)
COG4087 <760..823 CDD:226572 37/62 (60%)
Cation_ATPase_C 872..1044 CDD:279079 51/203 (25%)
atp2a1XP_012810385.1 P-type_ATPase_SERCA 5..989 CDD:319778 335/1052 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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