DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and SERCA

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster


Alignment Length:1042 Identity:314/1042 - (30%)
Similarity:495/1042 - (47%) Gaps:192/1042 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 DVRTGLKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVSVIMKQFDD--- 187
            |...||...:.|...|..|.|||........|:..:|||.:.|:.:||.:|::|.::..|::   
  Fly    19 DPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISFVLALFEEHEE 83

  Fly   188 ----AVSITIAILIVVTVAFI---QEYRSEKSLEELKKLVPPECHCLREGR--LDTFLARELVPG 243
                .|...:.:||::..|.:   ||..:|.::|.||:..|.....:|:.:  :....|:|:|||
  Fly    84 TFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQKVRAKEIVPG 148

  Fly   244 DIVHLNVGDRVPADVRL--FEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNMKNIAFMG 306
            |:|.::|||::|||:|:  ..:..|.||:|..|||:....|.||.:.:...|  :.:.|||.|.|
  Fly   149 DLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAV--NQDKKNILFSG 211

  Fly   307 TLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMDILGAQLSFYSFLIIGVIMLL-- 369
            |.|..|..:|:|:.||..:..|::...|...|..|||||:.:|..|.|||    .:|.||.:.  
  Fly   212 TNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLS----KVISVICVAVW 272

  Fly   370 --------------GWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKK 420
                          .|::|  ....|.|:|:|||||||||||.|:|..||||..||||:|:||:.
  Fly   273 AINIGHFNDPAHGGSWIKG--AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRS 335

  Fly   421 LPTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMA--------DVTGAGYNDQGEIHIRHC 477
            ||:||||||.:|||||||||||.|:|:.:.:...|....        ::||:.|...||:.:   
  Fly   336 LPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVFL--- 397

  Fly   478 NNVEMAKTNITNLLEIGAVC---------NNAYIQNGTLLGQPTEGALVAVAMKNGMYATAEN-- 531
            |...:...:...|.|:..:|         .|.:.|....:|:.||.||:.:|.|...::..::  
  Fly   398 NGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFSVNKSGL 462

  Fly   532 ----------------YVRIQEYPFSSEQKMMAVKC--IHKYNNNKEEIFFAKGALETLLPQCTK 578
                            :.:.....||.::|.|:..|  :...........|.|||.|.:|.:||.
  Fly   463 DRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVLERCTH 527

  Fly   579 YQFGTQTVPLTKQNEAEFLA--EAYEIGRKGLRVLALAKGRSMQ------------------DLI 623
            .:.||..||||...:|:.||  ..|..||..||.||||...|..                  :|.
  Fly   528 ARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLT 592

  Fly   624 YCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGG 688
            :.|:||:.||||..|.:||.....:|:||.::|||.:.||.||  .||                 
  Fly   593 FVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAI--CRR----------------- 638

  Fly   689 VPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGI-----DTIHHQTLSGQEMDQMNE 748
                                                   ||:     ||. .::.||:|.|.::.
  Fly   639 ---------------------------------------IGVFAEDEDTT-GKSYSGREFDDLSP 663

  Fly   749 HQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVC 813
            .:.........:|.||.|:||.:||:.||....|..||||||||..|||||:|||||| :||.|.
  Fly   664 TEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVA 727

  Fly   814 KEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQI 878
            |.||:|:|.:|:|.:|::|:|||:.|:.|::.|:|:.:|::|..:..|.|...:.:...|..:|:
  Fly   728 KSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQL 792

  Fly   879 LWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMIT-----KSVVVNVLLSASIIVLGTLW-V 937
            ||:|::.||.||.:||..|.|.|::::.||...:.:|:     :.:.:...:.|:.:.....| |
  Fly   793 LWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFV 857

  Fly   938 FQRE-----------------------MADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSV 979
            |..|                       ..|..:.......||..:..|..:|.||::..|:.:|:
  Fly   858 FSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLSENQSL 922

  Fly   980 FTIGLTTNRMFLLAVAFSIIGQMLVVYFPPLQMVFQTEALTPYDIFFLVSLTSSVLVVSEIKKWF 1044
            .|:....|...:.::|.|.....:::|...|..|||...|:..:...::..:..|:::.|..|:.
  Fly   923 ITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFV 987

  Fly  1045 ER 1046
            .|
  Fly   988 AR 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 314/1042 (30%)
Cation_ATPase_N 112..179 CDD:279080 17/52 (33%)
E1-E2_ATPase 191..425 CDD:278548 95/256 (37%)
Cation_ATPase 496..579 CDD:289987 23/111 (21%)
COG4087 <760..823 CDD:226572 38/62 (61%)
Cation_ATPase_C 872..1044 CDD:279079 44/200 (22%)
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 313/1040 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438612
Domainoid 1 1.000 100 1.000 Domainoid score I354
eggNOG 1 0.900 - - E2759_KOG0202
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 1 1.000 - - otm51342
orthoMCL 1 0.900 - - OOG6_100158
Panther 1 1.100 - - P PTHR42861
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.750

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