DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPoCk and atp1a1

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_989407.1 Gene:atp1a1 / 395044 XenbaseID:XB-GENE-484831 Length:1023 Species:Xenopus tropicalis


Alignment Length:1081 Identity:301/1081 - (27%)
Similarity:482/1081 - (44%) Gaps:186/1081 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLSTSESSTHSASEVAGRLQVDVRTGLK 132
            |.||..|    |:.||                |..|:   |.|....|..|:..:...|::.||.
 Frog    23 KKGKGKD----KDMDE----------------LKKEL---TMEDHKLSLDELHRKFGTDMQRGLS 64

  Fly   133 WTEAKYRAKII---GHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVSVIMKQFDDA------ 188
            ...|   |:|:   |.|.|......|.|.|:..|......:||...|::..:......|      
 Frog    65 TARA---AEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGITAATEEEPT 126

  Fly   189 -----VSITIAILIVVT--VAFIQEYRSEKSLEELKKLVPPECHCLREGRLDTFLARELVPGDIV 246
                 :.:.::.::::|  .::.||.:|.|.:|..|.:||.:...:|.|...:..|.::|.||:|
 Frog   127 NDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKLSINAEDVVLGDLV 191

  Fly   247 HLNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNMKNIAFMGTLVRC 311
            .:..|||:|||||:..|....:|.||.|||:||..:..|  ..|.|..:   .:||||..|....
 Frog   192 EVKGGDRIPADVRIISAHGCKVDNSSLTGESEPQTRSPD--FTNENPLE---TRNIAFFSTNCVE 251

  Fly   312 GNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMD-----ILGAQLSF-YSFLIIGVIMLLG 370
            |..:|:||:||:|:..|.:..:....|..:||:...::     |.|..:.. .||.|:.:|:...
 Frog   252 GTARGVVVNTGDRTVMGRIATLASGLEGGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILQYT 316

  Fly   371 WLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVICS 435
            ||      |.....:.:.||.:||||...|||.|.|...|||::|.:||.|..|||||..:.|||
 Frog   317 WL------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICS 375

  Fly   436 DKTGTLTKNEMT-ATIIITSDGYMADVTGAGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNN 499
            |||||||:|.|| |.:...:..:.||.|   .|..|.       :.:.:....|.|..:..:||.
 Frog   376 DKTGTLTQNRMTVAHMWFDNQIHEADTT---ENQSGA-------SFDKSSPTWTALSRVAGLCNR 430

  Fly   500 AYIQNG---------TLLGQPTEGALV-AVAMKNG-MYATAENYVRIQEYPFSSEQKMMAVKCIH 553
            |..|.|         .:.|..:|.||: .:.:..| :....|...::.|.||:|..|...  .:|
 Frog   431 AVFQAGQENTPILKRDVAGDASESALLKCIELCCGSVRDMREKNPKVAEIPFNSTNKYQL--SVH 493

  Fly   554 KYNNNKEE--IFFAKGALETLLPQCTKYQFGTQTVPLTKQNEAEFLAEAYEIGRKGLRV-----L 611
            |..|..|.  |...|||.|.:|.:|:......:..||.::.:..|.....|:|..|.||     |
 Frog   494 KNANPSESRYILVMKGAPERILDRCSTIVLQGKEQPLDEELKDAFQNAYLELGGLGERVLGFCHL 558

  Fly   612 ALAKGR--------------SMQDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQET 662
            ||:..:              ..::|.:.||:.:.||||..|.:::.....:|::|.|||||    
 Frog   559 ALSDDQFPDGFQFDTEEVNFPTENLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD---- 619

  Fly   663 ALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANL 727
                           |.|.|...|.||.:.|..        ...:::|    .|:..:|:   |.
 Frog   620 ---------------HPITAKAIAKGVGIISEG--------NETVEDI----AARLNIPV---NQ 654

  Fly   728 IGIDTIHHQTLSGQEMDQMNEHQLDKVANNVS--VFYRVSPRHKLEIVKSLQRSGNIVGMTGDGV 790
            :.........:.|.::..|.:.|:|.:..:.:  ||.|.||:.||.||:..||.|.||.:|||||
 Frog   655 VNPRDAKACVIHGSDLKDMAQEQIDDILKHHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 719

  Fly   791 NDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSI 855
            ||..||||||||||||..|:||.|:||||||::|:|.:|:..:|||:.||.|::..:.:.|:::|
 Frog   720 NDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNI 784

  Fly   856 AALALIALATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMITKSVV 920
            ..:....:..:.:|..||..:.||.|::..|..||.||..|..:.|::|::|||.|...:....:
 Frog   785 PEITPFLIFIVANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERL 849

  Fly   921 VN-------------------VLLSASIIVLGTL----------WVFQREMADGTLGKTKRDTTM 956
            ::                   |:|:.:..:..||          |....|.:.|.....::...:
 Frog   850 ISMAYGQIGMIQALGGFFTYFVILAENGFLPWTLLGIRVNWDDRWNNDVEDSYGQQWTYEQRKIV 914

  Fly   957 TFTCFVFF-------DMFNALSCRSQTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYFPPLQMVF 1014
            .|||...|       ...:.:.|:::..|||..|: .|::.:..:.........:.|.|.:.:..
 Frog   915 EFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGM-KNKILIFGLFEETALAAFLSYCPGMDVAL 978

  Fly  1015 QTEALTPYDIFFLVSLTSSVLVVSEIKK---------WFER 1046
            :...|.|...|.....:..:.:..|::|         |.|:
 Frog   979 RMYPLKPTWWFCAFPYSLLIFIYDEVRKLIIRRSPGGWVEK 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 291/1039 (28%)
Cation_ATPase_N 112..179 CDD:279080 18/69 (26%)
E1-E2_ATPase 191..425 CDD:278548 79/241 (33%)
Cation_ATPase 496..579 CDD:289987 27/95 (28%)
COG4087 <760..823 CDD:226572 43/62 (69%)
Cation_ATPase_C 872..1044 CDD:279079 41/216 (19%)
atp1a1NP_989407.1 ATPase-IIC_X-K 32..1023 CDD:273445 296/1068 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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