DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and Atp13a2

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:XP_006239308.1 Gene:Atp13a2 / 362645 RGDID:1307977 Length:1173 Species:Rattus norvegicus


Alignment Length:1016 Identity:226/1016 - (22%)
Similarity:392/1016 - (38%) Gaps:247/1016 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GRLQVDVR---TGLKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVSVIM 182
            ||...|:.   :||...:...|..|.|.|.:.:..     |.|::...:..:....|....|:.:
  Rat   186 GRACDDIHCSSSGLSLQDQAVRKTIYGPNVIGIPV-----KSYLQLLVDEALNPYYGFQAFSIAL 245

  Fly   183 KQFDDAVSITIAILIVVTVAF-IQEYRSEK---SLEELKKLVPPECHCLREGRLDTFLARELVPG 243
            ...|......:.|.::..::. :..|::.|   :|.::.||......|...|..:...:.|||||
  Rat   246 WLADHYYWYAVCIFLISAISICLSLYKTRKQSMTLRDMVKLSVRVQVCRPGGEEEWVDSSELVPG 310

  Fly   244 DIVHL-NVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKD-------HSNMK 300
            |.:.| ..|..:|.|..|. |.:..::|||.|||:.|..|        |.:.:       .::.:
  Rat   311 DCLVLPQEGGMMPCDAALV-AGECVVNESSLTGESIPVLK--------TALPEGPQPYCPETHRR 366

  Fly   301 NIAFMGTLV---RCGNGK---GIVVSTGE-RSEFGEVFKMMQAEEAPKTPLQKSMDILGAQLSFY 358
            :..|.||||   |...|.   .:|..||. .::.|.|..::..........:.||..:.| ||..
  Rat   367 HTLFCGTLVLQARAYLGPRVLAVVTRTGFCTAKGGLVSSILHPRPISFKFYRHSMKFVAA-LSVL 430

  Fly   359 SFL--IIGVIMLLGWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKL 421
            :.|  |..:|:|  :....|:.|:...::.|....:|..||..:||.......|:..:.......
  Rat   431 ALLGTIYSIIIL--YRNRVPVKEIVIRALDLVTVVVPPALPAAMTVCTLYAQSRLRTQGIFCIHP 493

  Fly   422 PTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYM------------------ADVTGAGYND 468
            ..:...|.:.::|.|||||||::.:....::...|.|                  |.||      
  Rat   494 LRINLGGKLRLVCFDKTGTLTEDGLDIMGVVPLKGQMLLPLVPEPCHLPPGPLLRALVT------ 552

  Fly   469 QGEIHIRHCNNV-EMAKTNITNLLEIGAVCNNAYI-QNGTLLGQPTEGALVAVAMK------NGM 525
                    |:.: ::..|.:.:.:::..|.:..:: :.|:..|...| ..|.|.|:      ...
  Rat   553 --------CHALSQLHDTLVGDPMDLKMVESTGWVLEEGSAAGSAPE-TQVLVVMRPPPRGPQQQ 608

  Fly   526 YATAENYVRIQEYPFSSEQKMMAVKCIHKYNNNKEEIFFAKGALETLLPQCTKYQFGTQTVPLTK 590
            ..:.|....::.:||||..:.|.|  :..:....:...:.||:.|.:...|:     .:|||   
  Rat   609 EESPEPVSVLRRFPFSSALQRMDV--VVTWPGATQPEAYVKGSPELVASLCS-----PETVP--- 663

  Fly   591 QNEAEFLAEAYEIGRKGLRVLALAKGRSM------------------QDLIYCGLVGITDPPRPL 637
             .:...:.::|...  |.||:||| |:.:                  |:|...||:.:.:..:|.
  Rat   664 -RDFPQVLQSYTAA--GYRVVALA-GKPLPTAPSLEAAQQLTRDTVEQELSLLGLLVMRNLLKPQ 724

  Fly   638 VRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNC 702
            ....|:.|.::|:|..|||||..:||:.:                           |.||.....
  Rat   725 TTPVIQTLRKTGIRTVMVTGDNLQTAVTV---------------------------AKACGMVGT 762

  Fly   703 LENAMKEIYLTALAQQGLPLV--------TANLIGI-DTI-------------HHQTLSGQEMDQ 745
            .|: :..|:.|. .:||.|..        :|.:.|. |.:             .|..|||.....
  Rat   763 QEH-LAIIHATH-PEQGQPAALEFLPTEPSAAMNGAKDPVQATDYPVEPESQSRHLALSGSTFAV 825

  Fly   746 MNEH---QLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGK 807
            :.:|   .|.||....:||.|::|..|.::|..|||....|||.|||.||..|||.||:||::.:
  Rat   826 LQKHFPKLLPKVLVQATVFARMAPEQKTQLVCELQRLQYCVGMCGDGANDCGALKAADVGISLSQ 890

  Fly   808 NGTDVCKEAADMILVNDDFHTIIAAIE-------EGK-------GIF-----YNIRNFVR----F 849
                  .||:    |...|.:.:|:||       ||:       .:|     |::..|:.    :
  Rat   891 ------AEAS----VVSPFTSSMASIECVPTVIREGRCSLDTSFSVFKYMALYSLTQFISVLILY 945

  Fly   850 QLSTSIAALALIAL--------ATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQK 906
            .::|::..|..:|:        |.||....|.       :.::...||...|.| ||...:|.| 
  Rat   946 TINTNLGDLQFLAIDLFITTTVAVLMSRTGPA-------LTLVRARPPGALLSV-PVLGSLLLQ- 1001

  Fly   907 PRNVKQPMITKSVVVNVLLSASIIVLGTLWVFQREMADGTLGKT--------KRDTTMTFTCFVF 963
                      .::|..:.|....:|:...|..       .|.:|        ..:.|:.|:...|
  Rat  1002 ----------VALVAGIQLGGYFLVIAQPWFV-------PLNRTVPAPDNLPNYENTVIFSLSGF 1049

  Fly   964 FDMFNALSCRSQTKSVFTIGLTTNRMFLLAVAFSIIGQMLV 1004
              .:..|:......:.|...|.||..||:|:|  ::|.:||
  Rat  1050 --QYLILAAAVSKGAPFRQPLYTNVPFLVALA--LLGSVLV 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 226/1016 (22%)
Cation_ATPase_N 112..179 CDD:279080 12/60 (20%)
E1-E2_ATPase 191..425 CDD:278548 59/254 (23%)
Cation_ATPase 496..579 CDD:289987 18/89 (20%)
COG4087 <760..823 CDD:226572 26/62 (42%)
Cation_ATPase_C 872..1044 CDD:279079 30/141 (21%)
Atp13a2XP_006239308.1 P-ATPase-V 39..1116 CDD:273738 226/1016 (22%)
P5-ATPase 39..>110 CDD:289194
E1-E2_ATPase 258..493 CDD:278548 59/246 (24%)
Cation_ATPase <621..658 CDD:289987 9/38 (24%)
COG4087 <843..>892 CDD:226572 24/54 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334764
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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