DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and ATP7

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_001259466.1 Gene:ATP7 / 32142 FlyBaseID:FBgn0030343 Length:1254 Species:Drosophila melanogaster


Alignment Length:1136 Identity:222/1136 - (19%)
Similarity:397/1136 - (34%) Gaps:394/1136 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKTPKPLTS-KRRTSPASP-------GSTVL--------------IESPTTSS---GVRNRRSKI 41
            |.:|.|.:| |:|.:|..|       ||.|.              |...|.:|   .:.....||
  Fly   169 SPSPAPASSPKKRATPTPPPPSYAQNGSAVAIPVEQELLTKCFLHIRGMTCASCVAAIEKHCKKI 233

  Fly    42 KGVDS------------KPNPQRTISHVKDSRAVPQNVKPGKVADMKDCKEPDEDN--------- 85
            .|:||            |.| ...::....::::.:...|.::.|     |||...         
  Fly   234 YGLDSILVALLAAKAEVKFN-ANVVTAENIAKSITELGFPTELID-----EPDNGEAEVELEIMG 292

  Fly    86 ------VDQQNGNIIQ-TGLTLTPEMLLS--------TSESSTHSASEVAGRL--QVDVRTGLKW 133
                  |::...:::: .|:|.....||:        |.|:...|..|....|  :..:.||   
  Fly   293 MTCASCVNKIESHVLKIRGVTTASVTLLTKRGKFRYITEETGPRSICEAIEALGFEAKLMTG--- 354

  Fly   134 TEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLL--GSALVSVI--MKQFDD------- 187
                 |.| :.||.|       ..|:.|.::||..::.|:  |..:|::|  |.:..|       
  Fly   355 -----RDK-MAHNYL-------EHKEEIRKWRNAFLVSLIFGGPCMVAMIYFMLEMSDKGHANMC 406

  Fly   188 ------AVSITIAILIVVTVAF-------IQEYRSEK----SLEELKKLV--------------- 220
                  ::...:..|:...|.|       :|.||:.|    :::.|..:|               
  Fly   407 CLVPGLSMENLVMFLLSTPVQFFGGFHFYVQSYRAIKHGTTNMDVLISMVTTISYVYSVAVVIAA 471

  Fly   221 ---------------PPEC-----------HCLREGRLDTFLAR------------ELVP----- 242
                           ||..           | :.:|:....|::            |:.|     
  Fly   472 VLLEQNSSPLTFFDTPPMLLIFISLGRWLEH-IAKGKTSEALSKLLSLKAADALLVEISPDFDII 535

  Fly   243 ------------GDIVHLNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKD 295
                        |||:.:..|.:||.|.::... ..|.|||..|||:.|..|             
  Fly   536 SEKVISVDYVQRGDILKVIPGAKVPVDGKVLYG-HSSCDESLITGESMPVAK------------- 586

  Fly   296 HSNMKNIAFMGTLVRCGNGKGIVV----STGERSEFGEVFKMMQAEEAPKTPLQKSMD-ILGAQL 355
               .|....:|..:   |..|:::    .|||.:...::.::::..:..|.|:|:..| |.|..:
  Fly   587 ---RKGSVVIGGSI---NQNGVLLVEATHTGENTTLAQIVRLVEEAQTSKAPIQQLADRIAGYFV 645

  Fly   356 SFYSFLIIGVIMLLGWL---QGKP-------------------LSEMFNISVSLAVAAIPEGL-- 396
            .|  .:::..|.|:.|:   ...|                   :|..|..::|:...|.|..|  
  Fly   646 PF--VVVVSSITLIAWIIIGFSNPNLVPVAMEHKMHMDQNTIIVSYAFKCALSVLAIACPCALGL 708

  Fly   397 --PIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVICSDKTGTLTK-NEMTA--TIIITSD- 455
              |..|.|....|    |....:||....:|....|..:..|||||:|. ..||:  |:.:|:. 
  Fly   709 ATPTAVMVATGTG----AINGVLVKGATALENAHKVKTVVFDKTGTITHGTPMTSKVTLFVTAQV 769

  Fly   456 -GYMADVTGAGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNNAYIQNGTLLGQPTEGALVAV 519
             .....:|..|..:|...|......|..||    ::|.:||.     .|.|: .|:.:....|..
  Fly   770 CSLARALTIVGAAEQNSEHPIASAIVHFAK----DMLNVGAT-----PQAGS-FGKSSHFQAVPG 824

  Fly   520 AMKNGMYATAENYVRIQEYPFSSEQKMMAVKCIHKYNNNKEEIFFAKGA-LETLLPQCT---KYQ 580
            .   |:..|..||.:......::: :::..:.:|: .:.:..:....|| :|.||||.:   ..:
  Fly   825 C---GIRVTVSNYEQTLRQACNAD-RIINYENLHR-THPQGSVPVDNGASIEHLLPQRSVRKSME 884

  Fly   581 FGTQTV--PLTKQNEAEFLAEAYEIGRKGLRVL----------ALAKGRSMQD-----------L 622
            ...|.:  .|..:.|.|.|.:...|....:.||          |:.....:.|           .
  Fly   885 LNNQQLLSDLVLEPEEELLTDQKIIDSPEILVLIGNREWMERNAIEVPLEISDCMTHEERKGHTA 949

  Fly   623 IYCGLVG-------ITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAI 680
            :.|.|.|       ::|..:|....::..|.:.|:.|.::|||.:.||.:|              
  Fly   950 VLCALNGQLVCMFAVSDMVKPEAHLAVYTLKRMGIDVVLLTGDNKNTAASI-------------- 1000

  Fly   681 PAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLSGQEMDQ 745
                                                        |..:||.|::.:.|       
  Fly  1001 --------------------------------------------AREVGIRTVYAEVL------- 1014

  Fly   746 MNEHQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGT 810
                                |.||:..::.:|.:|..|.|.||||||..||.:||:||.:.. ||
  Fly  1015 --------------------PSHKVAKIQRIQANGIRVAMVGDGVNDSPALAQADVGITIAA-GT 1058

  Fly   811 DVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIR---------NFVRFQLSTSI-AALALIALAT 865
            ||..||:|::|:.:|...::|.::..:.....||         |.:...|::.: |......|..
  Fly  1059 DVAAEASDIVLMRNDLLDVVACLDLSRCTVRRIRYNFFFASMYNLLGIPLASGLFAPYGFTLLPW 1123

  Fly   866 LMDIANPLNAMQILWINIIMD---GPPAQSL 893
            :..:|...:::.::..::::.   .|.|::|
  Fly  1124 MASVAMAASSVSVVCSSLLLKMYRKPTAKTL 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 190/967 (20%)
Cation_ATPase_N 112..179 CDD:279080 16/70 (23%)
E1-E2_ATPase 191..425 CDD:278548 63/345 (18%)
Cation_ATPase 496..579 CDD:289987 16/86 (19%)
COG4087 <760..823 CDD:226572 27/62 (44%)
Cation_ATPase_C 872..1044 CDD:279079 3/25 (12%)
ATP7NP_001259466.1 HMA 16..78 CDD:238219
HMA 97..159 CDD:238219
HMA 214..274 CDD:238219 11/60 (18%)
ZntA 285..1131 CDD:225127 193/989 (20%)
HMA 287..350 CDD:238219 10/62 (16%)
E1-E2_ATPase 489..735 CDD:278548 52/272 (19%)
COG4087 <984..1085 CDD:226572 41/186 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438601
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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