DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and Atp2b3

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:XP_038955468.1 Gene:Atp2b3 / 29599 RGDID:621304 Length:1330 Species:Rattus norvegicus


Alignment Length:1220 Identity:292/1220 - (23%)
Similarity:466/1220 - (38%) Gaps:388/1220 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KPNPQRTISHVKDSRAVPQNVKPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLSTSES 111
            ||..||.:.||......        :|:::...|                   |.....|...:.
  Rat    14 KPQQQREVPHVGGFGCT--------LAELRSLME-------------------LRGAEALQKIQE 51

  Fly   112 STHSASEVAGRLQVDVRTGL--KWTEAKYRAKIIGHNELLLVAEDP------TWKKYIEQFRNPL 168
            :....|.:..||:.....||  ...:.:.|.:|.|.|  .:..:.|      .|    |..::..
  Rat    52 AYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYGQN--FIPPKQPKTFLQLVW----EALQDVT 110

  Fly   169 ILLLLGSALVSVIMKQFD---------------------------DAVSITIAILIVVTVAFIQE 206
            :::|..:|:||:.:..:.                           :..:|.::::.||.|....:
  Rat   111 LIILEVAAIVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFND 175

  Fly   207 YRSEKSLEELKKLVPPE--CHCLREGRLDTFLARELVPGDIVHLNVGDRVPADVRLFEAVDLSID 269
            :..||....|:..:..|  ...:|.|:|.......||.|||..:..||.:|||..|.:..||.||
  Rat   176 WSKEKQFRGLQSRIEQEQKFTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQGNDLKID 240

  Fly   270 ESSFTGETEPARKITD---VLLNNTNVKDHSNMKNIAFMGTLVRCGNGKGIVVSTGERSEFGEVF 331
            |||.|||::..||..|   :||:.|:|.:                |:|:.:|.:.|..|:.|.:|
  Rat   241 ESSLTGESDHVRKSADKDPMLLSGTHVME----------------GSGRMVVTAVGVNSQTGIIF 289

  Fly   332 KMMQA---EEAPK-----------------------------TPL-------------------Q 345
            .::.|   ||..|                             .||                   :
  Rat   290 TLLGAGGEEEEKKDKKGKQQDGAMDSSQTRAKKQDGAVAMEMQPLKSAEGGEMEEREKKKANVPK 354

  Fly   346 KSMDILGAQLSFYSFLI---------IGVIMLL-------------GWL-QGKPL-----SEMFN 382
            |...:|..:|:..:..|         |.||:|:             .|| :..|:     .:.|.
  Rat   355 KEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVVDGRVWLAECTPVYVQYFVKFFI 419

  Fly   383 ISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMT 447
            |.|::.|.|:|||||:.||::||..|.:|.|.|::|:.|...||:|....||||||||||.|.||
  Rat   420 IGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT 484

  Fly   448 ATIIITSDGYMADVTGAGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNNAYI-------QNG 505
            ..     ..|:           |:.|.:...........|.:||......|:||.       :.|
  Rat   485 VV-----QSYL-----------GDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEG 533

  Fly   506 TL---LGQPTEGALVA--VAMKNGMYATAENYVRIQ---EYPFSSEQKMMAVKCIHKYNNNKEEI 562
            .|   :|..||.||:.  :.:|.......|.....|   .|.|:|.:|.|:. .|...:....  
  Rat   534 ALPRQVGNKTECALLGFILDLKRDFQPVREQIPEDQLYKVYTFNSVRKSMST-VIRMPDGGFR-- 595

  Fly   563 FFAKGALETLLPQCTKYQFGTQTV----PLTKQNEAEFLAEAYEIGRKGLRVLALA--------- 614
            .|:|||.|.||.:||........:    |..:.:..:.:.|  .:...|||.:.:|         
  Rat   596 LFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVKKIIE--PMACDGLRTICIAYRDFSAIQE 658

  Fly   615 -----KGRSMQDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQA 674
                 :...:.||....:|||.||.||.|.|:|....::|:.|:|||||...||.||        
  Rat   659 PDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAI-------- 715

  Fly   675 VPTHAIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLS 739
                               |:.|                .:.|.|...:             .|.
  Rat   716 -------------------AAKC----------------GIIQPGEDFL-------------CLE 732

  Fly   740 GQEMD--------QMNEHQLDKVANNVSVFYRVSPRHKLEIVKSL-------QRSGNIVGMTGDG 789
            |:|.:        ::.:.:||||...:.|..|.||..|..:||.:       ||  .:|.:||||
  Rat   733 GKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQR--QVVAVTGDG 795

  Fly   790 VNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTS 854
            .|||.||||||:|.|||..||||.|||:|:||.:|:|.:|:.|:..|:.::.:|..|::|||:.:
  Rat   796 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVN 860

  Fly   855 IAAL--------------------------------------------------------ALIAL 863
            :.|:                                                        .|:.|
  Rat   861 VVAVIVAFTGACITQNILMIPRGNLTPISSHFPLPHQPWNAHLLSVCELLSSFYFIDSIYGLVHL 925

  Fly   864 ATLMDI-------------------------ANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVL 903
            |.:..|                         .:||.|:|:||:|:|||...:.:|..||....:|
  Rat   926 APVTLIFKETLIGDDKKAGWGQHFCLFLPCEDSPLKAVQMLWVNLIMDTFASLALATEPPTESLL 990

  Fly   904 KQKPRNVKQPMITKSVVVNVLLSA--SIIVLGTLWVFQREMADGTLGKT-------KRDTTMTFT 959
            .:||....:|:|:::::.|:|..|  .:.::.||........|...|:.       ....|:.|.
  Rat   991 LRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFN 1055

  Fly   960 CFVFFDMFNALSCRS--QTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYF 1007
            .||...:||.::.|.  ..::||. |:.:|.:|...|..:...|:::|.|
  Rat  1056 TFVMMQLFNEINARKIHGERNVFD-GIFSNPIFCTIVLGTFGIQIVIVQF 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 282/1157 (24%)
Cation_ATPase_N 112..179 CDD:279080 14/74 (19%)
E1-E2_ATPase 191..425 CDD:278548 83/317 (26%)
Cation_ATPase 496..579 CDD:289987 28/97 (29%)
COG4087 <760..823 CDD:226572 37/69 (54%)
Cation_ATPase_C 872..1044 CDD:279079 41/147 (28%)
Atp2b3XP_038955468.1 ATPase-IIB_Ca 19..1142 CDD:273668 289/1215 (24%)
ATP_Ca_trans_C 1181..1256 CDD:403580
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334741
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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