DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and Atp2b3

DIOPT Version :10

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:XP_038955468.1 Gene:Atp2b3 / 29599 RGDID:621304 Length:1330 Species:Rattus norvegicus


Alignment Length:1216 Identity:292/1216 - (24%)
Similarity:469/1216 - (38%) Gaps:380/1216 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KPNPQRTISHVKDSRAVPQNVKPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLSTSES 111
            ||..||.:.||......        :|:::...|                   |.....|...:.
  Rat    14 KPQQQREVPHVGGFGCT--------LAELRSLME-------------------LRGAEALQKIQE 51

  Fly   112 STHSASEVAGRLQVDVRTGL--KWTEAKYRAKIIGHNELLLVAEDP-TWKKYI-EQFRNPLILLL 172
            :....|.:..||:.....||  ...:.:.|.:|.|.|  .:..:.| |:.:.: |..::..:::|
  Rat    52 AYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYGQN--FIPPKQPKTFLQLVWEALQDVTLIIL 114

  Fly   173 LGSALVSVIMKQFD---------------------------DAVSITIAILIVVTVAFIQEYRSE 210
            ..:|:||:.:..:.                           :..:|.::::.||.|....::..|
  Rat   115 EVAAIVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKE 179

  Fly   211 KSLEELKKLVPPE--CHCLREGRLDTFLARELVPGDIVHLNVGDRVPADVRLFEAVDLSIDESSF 273
            |....|:..:..|  ...:|.|:|.......||.|||..:..||.:|||..|.:..||.|||||.
  Rat   180 KQFRGLQSRIEQEQKFTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQGNDLKIDESSL 244

  Fly   274 TGETEPARKITD---VLLNNTNVKDHSNMKNIAFMGTLVRCGNGKGIVVSTGERSEFGEVFKMMQ 335
            |||::..||..|   :||:.|:|.:                |:|:.:|.:.|..|:.|.:|.::.
  Rat   245 TGESDHVRKSADKDPMLLSGTHVME----------------GSGRMVVTAVGVNSQTGIIFTLLG 293

  Fly   336 A---EEAPK-----------------------------TPL-------------------QKSMD 349
            |   ||..|                             .||                   :|...
  Rat   294 AGGEEEEKKDKKGKQQDGAMDSSQTRAKKQDGAVAMEMQPLKSAEGGEMEEREKKKANVPKKEKS 358

  Fly   350 ILGAQLSFYSFLI---------IGVIMLL-------------GWL-QGKPL-----SEMFNISVS 386
            :|..:|:..:..|         |.||:|:             .|| :..|:     .:.|.|.|:
  Rat   359 VLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVVDGRVWLAECTPVYVQYFVKFFIIGVT 423

  Fly   387 LAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMTATII 451
            :.|.|:|||||:.||::||..|.:|.|.|::|:.|...||:|....||||||||||.|.||..  
  Rat   424 VLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVV-- 486

  Fly   452 ITSDGYMADVTGAGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNNAYI-------QNGTL-- 507
               ..|:           |:.|.:...........|.:||......|:||.       :.|.|  
  Rat   487 ---QSYL-----------GDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEGALPR 537

  Fly   508 -LGQPTEGALVA--VAMKNGMYATAENYVRIQ---EYPFSSEQKMMAVKCIHKYNNNKEEIFFAK 566
             :|..||.||:.  :.:|.......|.....|   .|.|:|.:|.|:. .|...:....  .|:|
  Rat   538 QVGNKTECALLGFILDLKRDFQPVREQIPEDQLYKVYTFNSVRKSMST-VIRMPDGGFR--LFSK 599

  Fly   567 GALETLLPQCTKYQFGTQTV----PLTKQNEAEFLAEAYEIGRKGLRVLALA------------- 614
            ||.|.||.:||........:    |..:.:..:.:.|  .:...|||.:.:|             
  Rat   600 GASEILLKKCTNILNSNGELRGFRPRDRDDMVKKIIE--PMACDGLRTICIAYRDFSAIQEPDWD 662

  Fly   615 -KGRSMQDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTH 678
             :...:.||....:|||.||.||.|.|:|....::|:.|:|||||...||.||            
  Rat   663 NENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAI------------ 715

  Fly   679 AIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLSGQEM 743
                           |:.|                .:.|.|...:             .|.|:|.
  Rat   716 ---------------AAKC----------------GIIQPGEDFL-------------CLEGKEF 736

  Fly   744 D--------QMNEHQLDKVANNVSVFYRVSPRHKLEIVKSL-------QRSGNIVGMTGDGVNDG 793
            :        ::.:.:||||...:.|..|.||..|..:||.:       ||  .:|.:||||.|||
  Rat   737 NRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQR--QVVAVTGDGTNDG 799

  Fly   794 VALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAAL 858
            .||||||:|.|||..||||.|||:|:||.:|:|.:|:.|:..|:.::.:|..|::|||:.::.|:
  Rat   800 PALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV 864

  Fly   859 --------------------------------------------------------ALIALATLM 867
                                                                    .|:.||.:.
  Rat   865 IVAFTGACITQNILMIPRGNLTPISSHFPLPHQPWNAHLLSVCELLSSFYFIDSIYGLVHLAPVT 929

  Fly   868 DI-------------------------ANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKP 907
            .|                         .:||.|:|:||:|:|||...:.:|..||....:|.:||
  Rat   930 LIFKETLIGDDKKAGWGQHFCLFLPCEDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLLRKP 994

  Fly   908 RNVKQPMITKSVVVNVLLSA--SIIVLGTLWVFQREMADGTLGKT-------KRDTTMTFTCFVF 963
            ....:|:|:::::.|:|..|  .:.::.||........|...|:.       ....|:.|..||.
  Rat   995 YGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVM 1059

  Fly   964 FDMFNALSCRS--QTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYF 1007
            ..:||.::.|.  ..::||. |:.:|.:|...|..:...|:::|.|
  Rat  1060 MQLFNEINARKIHGERNVFD-GIFSNPIFCTIVLGTFGIQIVIVQF 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 P-type_ATPase_SPCA 139..1042 CDD:319779 277/1122 (25%)
Atp2b3XP_038955468.1 ATPase-IIB_Ca 19..1142 CDD:273668 289/1211 (24%)
ATP_Ca_trans_C 1181..1256 CDD:463575
Blue background indicates that the domain is not in the aligned region.

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