DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and Atp13a4

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_001178587.2 Gene:Atp13a4 / 288026 RGDID:1306927 Length:1193 Species:Rattus norvegicus


Alignment Length:1035 Identity:234/1035 - (22%)
Similarity:414/1035 - (40%) Gaps:198/1035 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GLKWTEAKYRAKIIGHN----ELLLVAEDPTWKKYIEQFRNPLILLLLGSALV--SVIMKQFDDA 188
            ||...|.:.|..|.|.|    |::     |.||..:::..||..:..|.|..:  |...|::..|
  Rat   170 GLTSEEQEIRRLICGPNAIDVEII-----PIWKLLVKEVLNPFYIFQLFSVCLWFSEDYKEYALA 229

  Fly   189 VSITIAILIVVTVAFIQEYRSEKSLEELKKLVPPECH-------CLREGRLDTFLARELVPGDIV 246
            :.:...|.|.:||     |...:...:|..||  |.|       ..|:.......:|.|||||::
  Rat   230 IILMSVISIALTV-----YDLRQQSVKLHHLV--ESHNSITVSVYERKAGAQDLESRLLVPGDLL 287

  Fly   247 HLNVGDRV--PADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNM-------KNI 302
            .| .|.||  |.|..|.:. ...:||...|||:.|   :|...|:.|.......|       ::|
  Rat   288 IL-TGSRVQMPCDAVLIDG-SCVVDEGMLTGESIP---VTKTPLSQTASSAPWKMQSEADPRRHI 347

  Fly   303 AFMGTLV----RCGNG--KGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSM--DILGAQLSFYS 359
            .|.||.|    ..|:|  :.:|:.||..:..|::.:.:.   .|| |:...:  |.:...|....
  Rat   348 LFCGTEVIQAKAAGSGTVRAVVLQTGFNTAKGDLVRSIL---YPK-PMNFKLYRDAIRFLLCLVG 408

  Fly   360 FLIIGVI--MLLGWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLP 422
            ...||:|  :.:..|.|:|..|:...::.:...|:|..||..:|..:.....|:.|:........
  Rat   409 TATIGMIYTLCVYVLSGEPPEEVVRKALDVITIAVPPALPAALTTGIIYAQRRLKKKGIFCISPQ 473

  Fly   423 TVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMADVTGAGYNDQGEIHIRHCNNVEMAKTNI 487
            .:...|.:|::|.|||||||:..:             |:.|....||......|    ..|....
  Rat   474 RINVCGQLNLVCFDKTGTLTRGGL-------------DLWGVVPCDQNGFQAVH----SFASGEA 521

  Fly   488 T---NLLEIGAVCNNAYIQNGTLLGQPTEGALVAVAM-----------KNGMYA----------- 527
            .   .|....|.|::..:.:||:.|.|.:..:.....           ...|.|           
  Rat   522 VPWGPLCAAMATCHSLILLDGTIQGDPLDLKMFEATQWEMTVSGDDFHNKEMLAHTMVVKPPDTV 586

  Fly   528 ---TAENYVRIQEYPFSSEQKMMAVKCIHKYNNNKEEIFFAKGALETLLPQCTKYQFGTQTVPLT 589
               .||....:.::||||..:.|.| .:.:....:  :.|.|||.|.:...|.     ..|||.|
  Rat   587 GQVPAEGLAILHQFPFSSALQRMTV-IVQETGGGR--MAFMKGAPERVASFCQ-----PDTVPTT 643

  Fly   590 KQNEAEFLAEAYEIGRKGLRVLALA--------------KGRSMQDLIYCGLVGITDPPRPLVRE 640
                  |::|......:|.||:|||              :.:...|||:.||:.:.:..:...|.
  Rat   644 ------FISELQVYTTQGFRVIALAYKKLETDCPTTTLMREKVESDLIFLGLLILENRLKEETRP 702

  Fly   641 SIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNCLEN 705
            .:|.|:.:.:|..|:|||..:||:.:   .|...:.:...............|:||..:...:|.
  Rat   703 VLEELISARIRTAMITGDNLQTAITV---ARKSGMVSEGQKVILVEANEATDSSSASITWKLVEE 764

  Fly   706 ------AMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLSGQEMDQMNEH---QLDKVANNVSVF 761
                  ..::.|:....:     |..|  |.:..:|..|||:....:::|   .|.|:..|.::|
  Rat   765 KKHGLFGSQDTYINIREE-----VPEN--GREGNYHFALSGKSFQVISQHFSSLLPKILINGTIF 822

  Fly   762 YRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDF 826
            .|:||..|..:|:..|:....|||.|||.||..|||.|.:|:::.:....|   |:.......:.
  Rat   823 ARMSPGQKSSLVEEFQKLDYFVGMCGDGANDCGALKMAHVGVSLSEQEASV---ASPFTSKTPNI 884

  Fly   827 HTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGPPAQ 891
            ..:...|:||:...  :.:|..|:.....:.:..:.:..|....|.|:..|.|:.::.:......
  Rat   885 ECVPHLIKEGRAAL--VTSFCMFKYMALYSMIQYVGVLLLYWKTNSLSNYQFLFQDLAITTLIGV 947

  Fly   892 SLGVEPVDHDVLKQKP--RNVKQPMITKSVVVNVLLSASIIVLGTLWVFQ--------------R 940
            ::.:...:..::..:|  |.:..|::. ||::|:|||.::.::|.:.|.:              |
  Rat   948 TMNLNGANPKLVPFRPAGRLISPPLLL-SVILNILLSLAMHIVGFILVQKQPWYSMDYHSVCPVR 1011

  Fly   941 EMADGTLG-------KTKRDTTM------------TFTCFVFFDMFNALSCRSQTKSVFTIGLTT 986
            ..:...|.       ||:.::|.            |..|.|...:|      |:.|. |.....|
  Rat  1012 NESVSALSASPNVPEKTRSNSTFASFENTTIWFLGTINCIVVALVF------SKGKP-FRQPTYT 1069

  Fly   987 NRMFLLAVAFSIIGQMLVVYFPPLQMVFQTEAL--TP--YDIFFLVSLTSSVLVVSEIKK 1042
            |.:|:|.:... :|..|.:.|..:..:.:...|  ||  :.::.|:.::|:.:|...::|
  Rat  1070 NYIFVLVLILQ-MGVCLFILFADIPELHRRLDLLCTPVLWRVYILIMVSSNFVVSLAVEK 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 234/1035 (23%)
Cation_ATPase_N 112..179 CDD:279080 15/54 (28%)
E1-E2_ATPase 191..425 CDD:278548 64/259 (25%)
Cation_ATPase 496..579 CDD:289987 21/107 (20%)
COG4087 <760..823 CDD:226572 22/62 (35%)
Cation_ATPase_C 872..1044 CDD:279079 40/210 (19%)
Atp13a4NP_001178587.2 P5-ATPase 17..142 CDD:403569
P-type_ATPase_cation 174..1000 CDD:319842 206/893 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334750
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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