DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and pma1

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_594360.1 Gene:pma1 / 2542664 PomBaseID:SPAC1071.10c Length:919 Species:Schizosaccharomyces pombe


Alignment Length:1066 Identity:249/1066 - (23%)
Similarity:431/1066 - (40%) Gaps:245/1066 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 HVKDSRAVPQNVKPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLS--TSESSTHSASE 118
            |..:.:|.|.. :|...|......|||:| :|           .|..|:...  ..|...:..:.
pombe    14 HAPEQQAPPPQ-QPAHAAAPAQDDEPDDD-ID-----------ALIEELFSEDVQEEQEDNDDAP 65

  Fly   119 VAGR--------LQVDVRTGLKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGS 175
            .||.        ||.|:.|||..:|.:.|.|..|.|::....|:| :.|:|..|..|:..::..:
pombe    66 AAGEAKAVPEELLQTDMNTGLTMSEVEERRKKYGLNQMKEELENP-FLKFIMFFVGPIQFVMEMA 129

  Fly   176 ALVSVIMKQFDDAVSITIAILIVVTVAFIQEYRSEKSLEELKKLVPPECHCLREGRLDTFLAREL 240
            |.::..::.:.|...|...:::...|.|:|||::...::||||.:..:...:|||::....|.|:
pombe   130 AALAAGLRDWVDFGVICALLMLNAVVGFVQEYQAGSIVDELKKSLALKAVVIREGQVHELEANEV 194

  Fly   241 VPGDIVHLNVGDRVPADVRLFEA-VDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNMKNIAF 304
            |||||:.|:.|..:.||.|:... |.|.:|:|:.|||             :..|..|......|.
pombe   195 VPGDILKLDEGTIICADGRVVTPDVHLQVDQSAITGE-------------SLAVDKHYGDPTFAS 246

  Fly   305 MGTLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMDILGAQLSFYSFLIIGVIMLL 369
            .|  |:.|.|..:|.:||:.:..|....::.|.........:.::.:|..|.....|.:..|...
pombe   247 SG--VKRGEGLMVVTATGDSTFVGRAASLVNAAAGGTGHFTEVLNGIGTILLVLVLLTLFCIYTA 309

  Fly   370 GWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVIC 434
            .:.:...|:.:...::::.:..:|.|||.|||.|:|:|...:|::.:||:||..:|:|..|.|:|
pombe   310 AFYRSVRLARLLEYTLAITIIGVPVGLPAVVTTTMAVGAAYLAEKQAIVQKLSAIESLAGVEVLC 374

  Fly   435 SDKTGTLTKNEMTATIIITSDGYMADVTGAGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNN 499
            ||||||||||:::.....|..|...|          ::.:..|......:..:..:       :.
pombe   375 SDKTGTLTKNKLSLGEPFTVSGVSGD----------DLVLTACLAASRKRKGLDAI-------DK 422

  Fly   500 AYIQNGTLLGQPTEGALVAVAMKN--GMYATAENYVRIQEYPFSSEQKMMA----------VKCI 552
            |:::                |:||  |..:....|..|:..||....|.:.          :.|:
pombe   423 AFLK----------------ALKNYPGPRSMLTKYKVIEFQPFDPVSKKVTAYVQAPDGTRITCV 471

  Fly   553 HKYNNNKEEIFFAKGA----LETLLPQCTKYQFGTQTVPLTKQNEAEFLAEAYEIGRKGLRVLAL 613
                         |||    |:|:          .:..|:.:...:.:..:..::..:|.|.|.:
pombe   472 -------------KGAPLWVLKTV----------EEDHPIPEDVLSAYKDKVGDLASRGYRSLGV 513

  Fly   614 AKGRSMQDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTH 678
            |:....|.....|::..:||||.....:|....:.|:||||:||||.:  :|.:.:|:|      
pombe   514 ARKIEGQHWEIMGIMPCSDPPRHDTARTISEAKRLGLRVKMLTGDAVD--IAKETARQL------ 570

  Fly   679 AIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLSGQEM 743
                                                  ..|..:..|..:|:       ..|..|
pombe   571 --------------------------------------GMGTNIYNAERLGL-------TGGGNM 590

  Fly   744 DQMNEHQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKN 808
            .....:...:.|:.   |..|.|:||..:|..||:.|.:|.||||||||..:|||||.|||: :.
pombe   591 PGSEVYDFVEAADG---FGEVFPQHKYAVVDILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EG 651

  Fly   809 GTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIANP- 872
            .||..:.|||::.:......||.|::..:.||:.:.::|.::::.|:.....:.|..:  |.|. 
pombe   652 ATDAARSAADIVFLAPGLSAIIDALKTSRQIFHRMYSYVVYRIALSLHLEIFLGLWLI--IRNQL 714

  Fly   873 LNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMI-TKSVVVNVLLSASIIVLGTLW 936
            ||...:::|.|..|   ..:|.: ..|:.....||.....|.: ..|.|:.::|:     :|| |
pombe   715 LNLELVVFIAIFAD---VATLAI-AYDNAPYSMKPVKWNLPRLWGLSTVIGIVLA-----IGT-W 769

  Fly   937 VFQREM-ADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVF-TIGLTTNRMF--------- 990
            :....| |.|    ..|.....|..              |.:.:| .|.||.|.:.         
pombe   770 ITNTTMIAQG----QNRGIVQNFGV--------------QDEVLFLEISLTENWLIFVTRCNGPF 816

  Fly   991 -----------------LLAVAFSIIG------QMLVVYFPPLQMVFQTEALTPYDIFFLVSLTS 1032
                             :||..|.|.|      |..:|....:.|.       .:.||.:::.|.
pombe   817 WSSIPSWQLSGAVLAVDILATMFCIFGWFKGGHQTSIVAVLRIWMY-------SFGIFCIMAGTY 874

  Fly  1033 SVLVVSEIKKWFERTMERKMYSTRSE 1058
            .:|..|   ..|:|.|..|...:|::
pombe   875 YILSES---AGFDRMMNGKPKESRNQ 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 234/999 (23%)
Cation_ATPase_N 112..179 CDD:279080 20/74 (27%)
E1-E2_ATPase 191..425 CDD:278548 64/234 (27%)
Cation_ATPase 496..579 CDD:289987 16/98 (16%)
COG4087 <760..823 CDD:226572 31/62 (50%)
Cation_ATPase_C 872..1044 CDD:279079 40/207 (19%)
pma1NP_594360.1 Cation_ATPase_N 76..136 CDD:214842 18/60 (30%)
ATPase-IIIA_H 85..842 CDD:273731 215/915 (23%)
E1-E2_ATPase 144..365 CDD:278548 64/235 (27%)
COG4087 <605..663 CDD:226572 31/58 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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