DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and atp1a1a.5

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_835200.1 Gene:atp1a1a.5 / 245703 ZFINID:ZDB-GENE-020501-1 Length:1023 Species:Danio rerio


Alignment Length:1113 Identity:314/1113 - (28%)
Similarity:490/1113 - (44%) Gaps:224/1113 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KDSRAVPQNVKPGKVADMKDCKEPDEDNVDQQNGNIIQTGLTLTPEMLLSTSESSTHSASEVAGR 122
            :|....|:..|..| .||.:.|:  |..:|...         ||.|              |::.:
Zfish    17 EDGVKTPKKGKKNK-KDMDELKK--EVEMDDHK---------LTME--------------ELSRK 55

  Fly   123 LQVDVRTGLKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQ-FRNPLILLLLGS-------ALVS 179
            ...|:..||..:.|.......|.|.|......|.|.::..| |.....||.:|:       ::.:
Zfish    56 YGTDLTKGLPVSRAMEVLMRDGPNALTPPVITPEWVRFCRQLFGGFQTLLWIGAFLCYFAFSIQA 120

  Fly   180 VIMKQFDDAVSITIAILIVVTV----AFIQEYRSEKSLEELKKLVPPECHCLREGRLDTFLAREL 240
            ...:..:|.:.:.|.:..||||    ::.||.:|.:.::..|.|||.:...:|:|......|.|:
Zfish   121 ATEEPVNDNLYLGIVLTFVVTVNGCFSYSQEAKSCRIMDSFKNLVPQKALVVRDGEKKIIDAEEV 185

  Fly   241 VPGDIVHLNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDHSNMKNIAFM 305
            |.||:|.:..||::|||:|:..:....:|.||.|||:||..:..|:...|.     ...:||||.
Zfish   186 VVGDLVEVKGGDKIPADIRIVSSHGCKVDNSSLTGESEPQIRTPDMSSENP-----LETRNIAFF 245

  Fly   306 GTLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTPLQKSMD-----ILGAQLSF-YSFLIIG 364
            .|....|..:||||:||:|:..|.:..:....|..:|||.:.::     |.|..:.. .:||||.
Zfish   246 STNCIDGAARGIVVNTGDRTVMGRIASLASNLEGGQTPLGREIEHFIHIITGVAVFLGTTFLIIS 310

  Fly   365 VIMLLGWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGC 429
            |::...||:|      ....:.|.||.:|||||..|||.|.|....|||:|.:||.|..|||||.
Zfish   311 VMLGFTWLEG------IIFLIGLIVANVPEGLPCTVTVALTLTAKHMAKKNCLVKNLEAVETLGS 369

  Fly   430 VNVICSDKTGTLTKNEMT-ATIIITSDGYMADV----TGAGYNDQGEIHIRHCNNVEMAKTNITN 489
            .:.||||||||||:|.|| |.:...:..::||.    |||.:              :.:....:.
Zfish   370 TSTICSDKTGTLTQNRMTVAHMWFDNQIHIADTTENQTGASF--------------DRSSATWSA 420

  Fly   490 LLEIGAVCNNAYIQNG---------TLLGQPTEGAL-----VAVAMKNGMYATAENYVRIQEYPF 540
            |..:..:||.|..|:.         ...|..:|.||     :......||   .|||.::.|.||
Zfish   421 LARVAGLCNRAVFQSNQSHLPVLRRETAGDASESALLKCIELCCGSVTGM---RENYPKVAEIPF 482

  Fly   541 SSEQKMMAVKCIHKYNNNKE--EIFFAKGALETLLPQCTKYQFGTQTVPLTKQNEAEFLAEAYEI 603
            :|..|...  .||:..|:.|  .:...|||.|.:|.:|:......:..||..:.:.:|.....::
Zfish   483 NSISKYQL--SIHENPNSSEPKHLLVMKGAPERILDRCSTILIEGKEHPLDDEMKEDFQNAYVQL 545

  Fly   604 GRKGLRVLALA----------KGRSM---------QDLIYCGLVGITDPPRPLVRESIEMLMQSG 649
            |..|.|||...          :|.:.         ::|.:.||:.:.||||..|.:::.....:|
Zfish   546 GGLGERVLGFCHFCLPDDQFPEGFAFDTEEMNFPTENLCFVGLMSMIDPPRAAVPDAVAKCRSAG 610

  Fly   650 VRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNCLENAMKEIYLTA 714
            ::|.|||||                   |.|.|...|.||.:.|.                    
Zfish   611 IKVIMVTGD-------------------HPITAKAIAKGVGIISE-------------------- 636

  Fly   715 LAQQGLPLVTANL-IGIDTIHHQ-----TLSGQEMDQMNEHQLDKVANNVS--VFYRVSPRHKLE 771
             ..:.:..:.|.| |.||.::.:     .:.|.|:..|.:.|||.|..:.:  ||.|.||:.||.
Zfish   637 -GNETVDDIAARLKIHIDEVNPRDAKACVIHGGELKNMTDEQLDDVLQHHTEIVFARTSPQQKLI 700

  Fly   772 IVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEG 836
            ||:..||.|.||.:|||||||..||||||||:|||..|:||.|:||||||::|:|.:|:..:|||
Zfish   701 IVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 765

  Fly   837 KGIFYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHD 901
            :.||.|::..:.:.|||.|..::...:..|..|..||..:.||.|::..|..||.|...|..:.|
Zfish   766 RLIFDNLKKSICYTLSTKIPEMSPFLMFVLAGIPLPLGTVTILCIDLGTDMVPAISFAYENAESD 830

  Fly   902 VLKQKPRNVKQPMITKSVVVNV------LLSA------SIIVL---------------------- 932
            ::|::|||.....:....:|:|      :::|      ..::|                      
Zfish   831 IMKRQPRNAATDRLVNERLVSVSYGQIGVMNAFGGFFTYFVILAENGFLPWDLVGLRIGWNDRYF 895

  Fly   933 -------GTLWVF-QREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVFTIGLTTNRM 989
                   |..|.: ||::.:.|.      .|..||..|.......|.|:|:..|:...|: .||:
Zfish   896 SEVEDSYGQQWTYEQRKVLEYTC------HTAYFTSIVIMQWTTLLVCKSRRLSLAKQGM-KNRV 953

  Fly   990 FLLAVAFSIIGQMLVV----YFPPLQMVFQTEALTPYDIFFLVSLTSSVLVVSEIKKWFERT--- 1047
                :.||:..:..:.    |.|.:.:..:...|.|...|........:.:..|::|.|.|.   
Zfish   954 ----LTFSLFEETAIAAFLSYCPGMDIAVRMYPLKPMWWFCAFPYMILIFIYDEVRKHFIRQNPG 1014

  Fly  1048 --MERKMY 1053
              :||:.|
Zfish  1015 GWVERETY 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 299/1055 (28%)
Cation_ATPase_N 112..179 CDD:279080 15/74 (20%)
E1-E2_ATPase 191..425 CDD:278548 84/243 (35%)
Cation_ATPase 496..579 CDD:289987 28/98 (29%)
COG4087 <760..823 CDD:226572 42/62 (68%)
Cation_ATPase_C 872..1044 CDD:279079 44/217 (20%)
atp1a1a.5NP_835200.1 ATPase-IIC_X-K 32..1023 CDD:273445 310/1097 (28%)
Cation_ATPase_N 41..115 CDD:214842 19/96 (20%)
E1-E2_ATPase 134..365 CDD:278548 84/241 (35%)
Cation_ATPase 427..521 CDD:289987 28/98 (29%)
COG4087 603..752 CDD:226572 68/188 (36%)
Cation_ATPase_C 799..1008 CDD:279079 44/219 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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