DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPoCk and Atp4a

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_036641.1 Gene:Atp4a / 24216 RGDID:2177 Length:1034 Species:Rattus norvegicus


Alignment Length:1068 Identity:292/1068 - (27%)
Similarity:473/1068 - (44%) Gaps:200/1068 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 EMLLSTSESSTH--SASEVAGRLQVDVRTGLKWTEAKYRAKII---GHNELLLVAEDPTWKKYIE 162
            |.:....|.:.|  |.||:..:.|.....|||   |...|:::   |.|.|......|.:.|:..
  Rat    43 ENMKKEMEMNDHQLSVSELEQKYQTSATKGLK---ASLAAELLLRDGPNALRPPRGTPEYVKFAR 104

  Fly   163 QFRNPLILLLLGSALVSVIMKQF---------DDAVSITIAILIVVTV----AFIQEYRSEKSLE 214
            |....|..|:..:|.:.:|....         ||.:.:.:|::.||.|    .:.||::|...:.
  Rat   105 QLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIA 169

  Fly   215 ELKKLVPPECHCLREGRLDTFLARELVPGDIVHLNVGDRVPADVRLFEAVDLSIDESSFTGETEP 279
            ..|.|||.:...:|:|......|.:||.||:|.:..|||||||:|:..|....:|.||.|||:||
  Rat   170 SFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILSAQGCKVDNSSLTGESEP 234

  Fly   280 ARKITDVLLNNTNVKDHSN---MKNIAFMGTLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPK 341
            ..:..:.        .|.:   .:||||..|:...|..:|:|||||:|:..|.:..:....|..|
  Rat   235 QTRSPEC--------THESPLETRNIAFFSTMCLEGTAQGLVVSTGDRTIIGRIASLASGVENEK 291

  Fly   342 TP----LQKSMDILGAQLSFYSFLIIGVIMLLGWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTV 402
            ||    ::..:||:......:......|.|.:|:    .........:::.||.:||||...|||
  Rat   292 TPIAIEIEHFVDIIAGLAILFGATFFVVAMCIGY----TFLRAMVFFMAIVVAYVPEGLLATVTV 352

  Fly   403 TLALGVMRMAKRNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMTAT-IIITSDGYMADVTGAGY 466
            .|:|...|:|.:|.:||.|..|||||..:|||||||||||:|.||.: :...:..:.||.|    
  Rat   353 CLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHTADTT---- 413

  Fly   467 NDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNNAYIQNG---------TLLGQPTEGALV---AV 519
            .||..      ...:.:......|..:..:||.|..::|         .::|..:|.||:   .:
  Rat   414 EDQSG------QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSEL 472

  Fly   520 AMKNGMYATAENYVRIQEYPFSSEQKMMAVKCIHKYNNNKE--EIFFAKGALETLLPQCTKYQFG 582
            .:.|.| ...:.:.::.|.||:|..|...  .||...:.::  .:...|||.|.:|.:|:.....
  Rat   473 TLGNAM-GYRDRFPKVCEIPFNSTNKFQL--SIHTLEDPRDPRHLLVMKGAPERVLERCSSILIK 534

  Fly   583 TQTVPLTKQNEAEFLAEAYEIGRKGLRVLAL-------------------AKGRSMQDLIYCGLV 628
            .|.:||.:|....|......:|..|.|||..                   |.......|.:.|||
  Rat   535 GQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLNEKDYPPGYTFDVEAMNFPSSGLCFAGLV 599

  Fly   629 GITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCS 693
            .:.||||..|.:::.....:|:||.|||||                   |.|.|...|..|.:.|
  Rat   600 SMIDPPRATVPDAVLKCRTAGIRVIMVTGD-------------------HPITAKAIAASVGIIS 645

  Fly   694 ASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQ-----TLSGQEMDQMNEHQLDK 753
            ..:        ..:::|    .|:..:|        :|.::.:     .::|.::..|:..:|.:
  Rat   646 EGS--------ETVEDI----AARLRMP--------VDQVNKKDARACVINGMQLKDMDPSELVE 690

  Fly   754 V--ANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEA 816
            .  .:...||.|.||:.||.||:|.||.|.||.:|||||||..||||||||:|||..|:|..|.|
  Rat   691 ALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755

  Fly   817 ADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWI 881
            |||||::|:|.:|:..:|:|:.||.|::..:.:.|:.:|..|....:...:.:..||..:.||:|
  Rat   756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFI 820

  Fly   882 NIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMITKSVVVNVLLSA-SIIVLGTLWVFQ------ 939
            .:..|..|:.||..|..:.|::..:|||.::..:     ||..|:| |...:|.:..|.      
  Rat   821 ELCTDIFPSVSLAYEKAESDIMHLRPRNPRRDRL-----VNEPLAAYSYFQIGAIQSFAGFADYF 880

  Fly   940 -------------------------REMADG-----TLGKTKRDTTMTFTCF-VFF------DMF 967
                                     :::.|.     |.|:.   ....:||: |||      .:.
  Rat   881 TAMAQEGWFPLLCVGLRPQWEDHHLQDLQDSYGQEWTFGQR---LYQQYTCYTVFFISIEMCQIA 942

  Fly   968 NALSCRSQTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYFPPLQMVFQTEALTPYDI-FFLVSLT 1031
            :.|..:::..|.|..|...||:.::|:.|.:.....:.|.|.:..:|.   ..|... ::||.:.
  Rat   943 DVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFN---FMPIRFQWWLVPMP 1004

  Fly  1032 SSVL--VVSEIKK---------WFERTM 1048
            ..:|  |..||:|         |:::.:
  Rat  1005 FGLLIFVYDEIRKLGVRCCPGSWWDQEL 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 291/1061 (27%)
Cation_ATPase_N 112..179 CDD:279080 19/71 (27%)
E1-E2_ATPase 191..425 CDD:278548 77/244 (32%)
Cation_ATPase 496..579 CDD:289987 23/96 (24%)
COG4087 <760..823 CDD:226572 42/62 (68%)
Cation_ATPase_C 872..1044 CDD:279079 48/227 (21%)
Atp4aNP_036641.1 H-K_ATPase_N 2..>27 CDD:286172
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..40
ATPase-IIC_X-K 42..1034 CDD:273445 292/1068 (27%)
Cation_ATPase_N 50..124 CDD:214842 20/76 (26%)
E1-E2_ATPase 145..375 CDD:278548 77/241 (32%)
Cation_ATPase 437..531 CDD:289987 23/96 (24%)
COG4087 <687..>742 CDD:226572 30/54 (56%)
Cation_ATPase_C 809..1018 CDD:279079 47/219 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334766
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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