DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPoCk and Atp2b2

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_036640.1 Gene:Atp2b2 / 24215 RGDID:2176 Length:1198 Species:Rattus norvegicus


Alignment Length:1069 Identity:284/1069 - (26%)
Similarity:458/1069 - (42%) Gaps:270/1069 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 THSASE-VAGRLQVDVRTGLKWT--EAKYRAKIIGHNELLLVAEDP------TWKKYIEQFRNPL 168
            |:..:| :..||:.....||..|  :.:.|.:|.|.|  .:..:.|      .|    |..::..
  Rat    49 TYGDTESICRRLKTSPVEGLPGTAPDLEKRKQIFGQN--FIPPKKPKTFLQLVW----EALQDVT 107

  Fly   169 ILLLLGSALVSVIMKQFD---------------------------DAVSITIAILIVVTVAFIQE 206
            :::|..:|::|:.:..:.                           :..:|.::::.||.|....:
  Rat   108 LIILEIAAIISLGLSFYHPPGESNEGCATAQGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFND 172

  Fly   207 YRSEKSLEELKKLVPPE--CHCLREGRLDTFLARELVPGDIVHLNVGDRVPADVRLFEAVDLSID 269
            :..||....|:..:..|  ...:|.|::......|:|.|||..:..||.:|||....:..||.||
  Rat   173 WSKEKQFRGLQSRIEQEQKFTVVRAGQVVQIPVAEIVVGDIAQIKYGDLLPADGLFIQGNDLKID 237

  Fly   270 ESSFTGETEPARKITD---VLLNNTNVKDHSNMKNIAFMGTLVRCGNGKGIVVSTGERSEFGEVF 331
            |||.|||::..||..|   :||:.|:|.:                |:|:.:|.:.|..|:.|.:|
  Rat   238 ESSLTGESDQVRKSVDKDPMLLSGTHVME----------------GSGRMVVTAVGVNSQTGIIF 286

  Fly   332 KMMQA---EEAPKTPLQKSMD--------------------------------ILGAQLSFYSFL 361
            .::.|   ||..|....|..|                                :|..:|:..:..
  Rat   287 TLLGAGGEEEEKKDKKAKQQDGAAAMEMQPLKSAEGGDADDKKKANMHKKEKSVLQGKLTKLAVQ 351

  Fly   362 I---------IGVIMLLGW-------LQGKP-LSE-----------MFNISVSLAVAAIPEGLPI 398
            |         |.||:|:.:       :..|| |:|           .|.|.|::.|.|:|||||:
  Rat   352 IGKAGLVMSAITVIILVLYFTVDTFVVNKKPWLTECTPVYVQYFVKFFIIGVTVLVVAVPEGLPL 416

  Fly   399 VVTVTLALGVMRMAKRNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMADVTG 463
            .||::||..|.:|.|.|::|:.|...||:|....||||||||||.|.||..     ..|:.||..
  Rat   417 AVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVV-----QAYVGDVHY 476

  Fly   464 AGYNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNNAYI-------QNGTL---LGQPTEGALVA 518
            ....|...|:         |||  ..||......|:||.       :.|.|   :|..||..|:.
  Rat   477 KEIPDPSSIN---------AKT--LELLVNAIAINSAYTTKILPPEKEGALPRQVGNKTECGLLG 530

  Fly   519 VAMKNGMYATAENY--VRIQ--------EYPFSSEQKMMA--VKCIHKYNNNKEEIF--FAKGAL 569
            ..:.     ..::|  ||.|        .|.|:|.:|.|:  :|.       .:|.|  ::|||.
  Rat   531 FVLD-----LRQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKM-------PDESFRMYSKGAS 583

  Fly   570 ETLLPQCTKYQFGT-QTVPLTKQNEAEFLAEAYE-IGRKGLRVLALA--------------KGRS 618
            |.:|.:|.|...|. :......::..|.:.:..| :...|||.:.:|              :...
  Rat   584 EIVLKKCCKILSGAGEPRVFRPRDRDEMVKKVIEPMACDGLRTICVAYRDFPSSPEPDWDNENDI 648

  Fly   619 MQDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAW 683
            :.:|....:|||.||.||.|.|:|....::|:.|:|||||...||.||            ||...
  Rat   649 LNELTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAI------------AIKCG 701

  Fly   684 PTAGGVPLCSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLSGQEMDQMNE 748
            ....|....         |||.  ||.......::|                         ::.:
  Rat   702 IIHPGEDFL---------CLEG--KEFNRRIRNEKG-------------------------EIEQ 730

  Fly   749 HQLDKVANNVSVFYRVSPRHKLEIVKSL-------QRSGNIVGMTGDGVNDGVALKKADIGIAMG 806
            .::||:...:.|..|.||..|..:||.:       ||  .:|.:||||.|||.||||||:|.|||
  Rat   731 ERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTHTEQR--QVVAVTGDGTNDGPALKKADVGFAMG 793

  Fly   807 KNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIAN 871
            ..||||.|||:|:||.:|:|.:|:.|:..|:.::.:|..|::|||:.::.|:.:......:...:
  Rat   794 IAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDS 858

  Fly   872 PLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMITKSVVVNVLLSA--SIIVLGT 934
            ||.|:|:||:|:|||...:.:|..||....:|.:||....:|:|:::::.|:|..|  .:.::.|
  Rat   859 PLKAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFT 923

  Fly   935 LWVFQREMADGTLGKT-------KRDTTMTFTCFVFFDMFNALSCRS--QTKSVFTIGLTTNRMF 990
            |.....:|.....|:.       ....|:.|..||...:||.::.|.  ..::||. |:..|.:|
  Rat   924 LLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFD-GIFRNPIF 987

  Fly   991 LLAVAFSIIGQMLVVYF-------PPLQM 1012
            ...|..:...|:::|.|       .|||:
  Rat   988 CTIVLGTFAIQIVIVQFGGKPFSCSPLQL 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 284/1069 (27%)
Cation_ATPase_N 112..179 CDD:279080 16/74 (22%)
E1-E2_ATPase 191..425 CDD:278548 81/301 (27%)
Cation_ATPase 496..579 CDD:289987 27/106 (25%)
COG4087 <760..823 CDD:226572 37/69 (54%)
Cation_ATPase_C 872..1044 CDD:279079 44/159 (28%)
Atp2b2NP_036640.1 ATPase-IIB_Ca 12..1042 CDD:273668 284/1069 (27%)
Cation_ATPase_N 51..113 CDD:279080 14/67 (21%)
E1-E2_ATPase 161..443 CDD:278548 80/297 (27%)
Cation_ATPase 504..593 CDD:289987 24/100 (24%)
HAD <645..784 CDD:289480 51/188 (27%)
Cation_ATPase_C 858..1036 CDD:279079 44/160 (28%)
ATP_Ca_trans_C 1081..1128 CDD:289209
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334745
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.