DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPoCk and atp4a

DIOPT Version :9

Sequence 1:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster
Sequence 2:XP_031762229.1 Gene:atp4a / 100488221 XenbaseID:XB-GENE-486104 Length:1031 Species:Xenopus tropicalis


Alignment Length:1042 Identity:287/1042 - (27%)
Similarity:472/1042 - (45%) Gaps:180/1042 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 EVAGRLQVDVRTGLKWTEAKYRAKII---GHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVS 179
            |:..:...:|..|:|   |.:.|:|:   |.|||......|.:.|:..|....|..|:..:|::.
 Frog    57 ELEQKYNTNVTKGMK---ATFAAEILIRDGPNELKPPKGTPEYVKFARQLAGGLQCLMWVAAVIC 118

  Fly   180 VIMKQFDDA-----------VSITIAILIVVTVAF--IQEYRSEKSLEELKKLVPPECHCLREGR 231
            :|....:.|           ::||:..::|||..|  .||::|...:...|.|||.:...||:|.
 Frog   119 LIAFGIECAQGDLTSADNLYLAITLIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVLRDGE 183

  Fly   232 LDTFLARELVPGDIVHLNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVKDH 296
            .....|.:||.||:|.:..|||||||:|:..:....:|.||.|||:||..:..:.        .|
 Frog   184 KFQINANQLVVGDLVEIKGGDRVPADIRIITSQGCKVDNSSLTGESEPQTRSPEY--------TH 240

  Fly   297 SN---MKNIAFMGTLVRCGNGKGIVVSTGERSEFGEVFKMMQAEEAPKTP----LQKSMDILGAQ 354
            .:   .:||||..|:...|...|::::||:|:..|.:..:.......|||    ::..:||:...
 Frog   241 ESPLETRNIAFFSTMCLEGTATGVIINTGDRTIIGRIASLASGVGNEKTPIAIEIEHFVDIIAGL 305

  Fly   355 LSFYSFLIIGVIMLLGWLQGKPLSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVK 419
            ..|:......|.|::|:    |........:::.||.:||||...|||.|:|...|:|::|.:||
 Frog   306 AIFFGATFFVVAMVIGY----PFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLARKNCVVK 366

  Fly   420 KLPTVETLGCVNVICSDKTGTLTKNEMTAT-IIITSDGYMADVTGAGYNDQGEIHIRHCNNVEMA 483
            .|..|||||..:|||||||||||:|.||.: :...:..:.||.|    .||........::...|
 Frog   367 NLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNQIHSADTT----EDQSGQSFDQTSDTWRA 427

  Fly   484 KTNITNLLEIGAVCNNAYIQNG---------TLLGQPTEGALV---AVAMKNGMYATAENYVRIQ 536
            .:.:|:|      ||.|..::|         .::|..:|.||:   .:.:.|.| ...:.:.:..
 Frog   428 LSKVTSL------CNRACFKSGQDGVPIPKRIVIGDASETALLKFSELTVGNVM-EYRDRFKKAT 485

  Fly   537 EYPFSSEQKMMAVKCIHKYNN--NKEEIFFAKGALETLLPQCTKYQFGTQTVPLTKQNEAEFLAE 599
            |.||:|..|...  .||:..:  :...:...|||.|.:|.:|:......|.:||.:|.:..|...
 Frog   486 ELPFNSTNKFQL--SIHELQDPLDLRYLLVMKGAPERILERCSTIMIKGQELPLDEQWKEAFQTA 548

  Fly   600 AYEIGRKGLRVLALA----------KGRSM---------QDLIYCGLVGITDPPRPLVRESIEML 645
            ..::|..|.|||...          :|.|.         ..|.:.||:.:.||||..|.:::...
 Frog   549 YMDLGGLGERVLGFCHLYLNEKEYPRGFSFDTEEMNFPTSGLCFAGLISMIDPPRATVPDAVMKC 613

  Fly   646 MQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASACCSTNCLENAMKEI 710
            ..:|:||.|||||...||.||..|..:.:..:..:........:|:...:...:..|:.|     
 Frog   614 RTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRIPVEQVNKRDARACVIN----- 673

  Fly   711 YLTALAQQGLPLVTANLIGIDTIHHQTLSGQEMDQMNEHQLDKV-ANNVSVFYRVSPRHKLEIVK 774
                                        .||..|..:|..::.: .:...||.|.||:.||.||:
 Frog   674 ----------------------------GGQLKDMTSEELVEALKLHPEMVFARTSPQQKLIIVE 710

  Fly   775 SLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGI 839
            |.|:.|.||.:|||||||..||||||||:|||..|:|..|.||||||::|:|.:|:..:|:|:.|
 Frog   711 SCQKLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLI 775

  Fly   840 FYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVLK 904
            |.|::..:.:.|:.:|..||...:.....:..||..:.||:|.:..|..|:.||..|..:.|::.
 Frog   776 FDNLKKSIAYTLTKNIPELAPYLIYITASVPLPLGCITILFIELCTDIFPSVSLAYERAESDIMH 840

  Fly   905 QKPRNVKQP-MITKSVVVNVLLSASII----------------------VLG--TLWVFQ--REM 942
            .||||.::. ::.:::.|.......||                      |||  :.|..|  :::
 Frog   841 LKPRNPRRDRLVNEALAVYSYFQVGIIQSFAGFVDYFTVMAQEGWFPAYVLGLRSHWENQHLQDL 905

  Fly   943 AD--GTLGKTKRDTTMTFTCF-VFF------DMFNALSCRSQTKSVFTIGLTTNRMFLLAVAFSI 998
            .|  |......:.....:.|: |||      .:.:.|..:::..|||..|...|::.::|:.|.:
 Frog   906 EDSYGQQWTFSQRLYQQYNCYTVFFISIEVCQIADVLIRKTRRLSVFQQGFFRNKVLVIAIVFQL 970

  Fly   999 IGQMLVVYFPPLQMVFQTEAL--------TPYDIFFLVSLTSSVLVVSEIKK---------WFER 1046
            .....:.|.|.:..||....:        .|:.|.        :.|..||:|         |:::
 Frog   971 CLGNFLCYCPGMPNVFNFMPIRFQWWLVPVPFGIL--------IFVYDEIRKLGVRRNPGSWYDK 1027

  Fly  1047 TM 1048
            .:
 Frog  1028 EL 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPoCkNP_001262220.1 ATPase-IIA2_Ca 110..1049 CDD:130585 287/1042 (28%)
Cation_ATPase_N 112..179 CDD:279080 17/63 (27%)
E1-E2_ATPase 191..425 CDD:278548 77/242 (32%)
Cation_ATPase 496..579 CDD:289987 23/96 (24%)
COG4087 <760..823 CDD:226572 41/62 (66%)
Cation_ATPase_C 872..1044 CDD:279079 47/224 (21%)
atp4aXP_031762229.1 ATPase-IIC_X-K 39..1031 CDD:273445 287/1042 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.