DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11241 and gabT

DIOPT Version :10

Sequence 1:NP_730741.2 Gene:CG11241 / 40492 FlyBaseID:FBgn0037186 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_417148.1 Gene:gabT / 948067 ECOCYCID:EG10361 Length:426 Species:Escherichia coli


Alignment Length:448 Identity:139/448 - (31%)
Similarity:203/448 - (45%) Gaps:42/448 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LKTRRNHLTPNLLAHFKKPLVIHAGHMQWLYDHEGRRYLDMFGGIVTVSVGHCHPKVNQALSEQT 126
            |..||:...|..:... .|:.........::|.|||.|||..|||..::.||.||||..|:..|.
E. coli     7 LMQRRSQAIPRGVGQI-HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQL 70

  Fly   127 AKLWHTT-NIYMHPKIHEYAERLVAKFPGDL-KSVCFVNSGSEANDLAMLMARLYTGNQDILSLR 189
            .||.||. .:..:....|..|.:..|.|||. |....|.:||||.:.|:.:||..|.....::..
E. coli    71 KKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFS 135

  Fly   190 NCYHGMSPYTMGLTA----HSTWRFPLPGVNSGLVHV---MNPDPYQGIWGGSNCRDSPVQTTRK 247
            ..|||.:.||:.||.    :|.....:||      ||   :.|.|..||                
E. coli   136 GAYHGRTHYTLALTGKVNPYSAGMGLMPG------HVYRALYPCPLHGI---------------- 178

  Fly   248 CQCTVGCQAGDAYYNELEETFKYSLPRGKVAAMFAESIQGVGGTVQFPKGYLKRAAALVRANGGL 312
                    :.|.....:...||.......:||:..|.:||.||.......:::|..||...:|.:
E. coli   179 --------SEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIM 235

  Fly   313 FVADEVQTGFGRTGEHFWGFESHDYVPDIVTMAKGIGNGFPLAAVVTTPEIAASLSQALHFNTYG 377
            .:|||||:|.||||..| ..|.....||:.|.||.|..|||||.|....|:..:::......||.
E. coli   236 LIADEVQSGAGRTGTLF-AMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYA 299

  Fly   378 GNPMASAVGIAVLDVIEEEQLQRNSLEVGTYFLKGLAELQQRFEIIGDVRGKGLMIGVELVGNRE 442
            |||:|....:.||.|.|:|.|.:.:.::|.....||..:.::...||||||.|.||.:||..:.:
E. coli   300 GNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGD 364

  Fly   443 KRTPLATPHVLDIWEKCKDQGVLLGRGGLHGNVLSMRPPLCLCAEDVEFALETLEEAF 500
            ...|.| ....:|..:.:|:|::|...|.:.|||.:..||.:....:...||.:.:.|
E. coli   365 HNKPDA-KLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCF 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11241NP_730741.2 ArgD 59..501 CDD:439930 139/448 (31%)
gabTNP_417148.1 PRK08088 1..425 CDD:236149 139/448 (31%)

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